BLASTX nr result
ID: Dioscorea21_contig00027028
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00027028
(239 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|2... 94 2e-17
emb|CBI38872.3| unnamed protein product [Vitis vinifera] 89 4e-16
ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi... 89 4e-16
emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera] 87 2e-15
ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containi... 86 2e-15
>ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|222861492|gb|EEE99034.1|
predicted protein [Populus trichocarpa]
Length = 643
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/74 (59%), Positives = 53/74 (71%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
A QLF + RD++ WN+MI G VKCG+ DAQ LFD+MP R+I SW MID + K G +
Sbjct: 246 AWQLFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRV 305
Query: 44 DSARILFDEMPERD 3
D AR LFDEMPERD
Sbjct: 306 DIARSLFDEMPERD 319
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = -1
Query: 191 DVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNIDSARILFDEMP 12
D+ L N +I+ VKCG A +FD+MP+R+ S+N+MID + K G ID AR++FD +P
Sbjct: 161 DLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIP 220
>emb|CBI38872.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 89.0 bits (219), Expect = 4e-16
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
A +LF RD++ WN+MI G VKCG+ +A LF+QMP+R++ SW M+D + K+G I
Sbjct: 241 AWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEI 300
Query: 44 DSARILFDEMPERD 3
D AR LFDEMPERD
Sbjct: 301 DIARGLFDEMPERD 314
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMP--ERNISSWNTMIDMHCKM- 54
ARQLF+R RD V +N+MI G VK G A++LFD MP ++N+ SWN+MI + +
Sbjct: 176 ARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSE 235
Query: 53 GNIDSARILFDEMPERD 3
+ A LF+EMP+RD
Sbjct: 236 EGLRVAWELFEEMPKRD 252
Score = 57.4 bits (137), Expect = 1e-06
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
A LFN+ RDVV W M+ G K G+ A+ LFD+MPER++ S N M+ + + G++
Sbjct: 272 AHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHL 331
Query: 44 DSARILFDEMPER 6
A F +M R
Sbjct: 332 MEALNFFHDMLSR 344
>ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 89.0 bits (219), Expect = 4e-16
Identities = 40/74 (54%), Positives = 53/74 (71%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
A +LF RD++ WN+MI G VKCG+ +A LF+QMP+R++ SW M+D + K+G I
Sbjct: 241 AWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEI 300
Query: 44 DSARILFDEMPERD 3
D AR LFDEMPERD
Sbjct: 301 DIARGLFDEMPERD 314
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMP--ERNISSWNTMIDMHCKM- 54
ARQLF+R RD V +N+MI G VK G A++LFD MP ++N+ SWN+MI + +
Sbjct: 176 ARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSE 235
Query: 53 GNIDSARILFDEMPERD 3
+ A LF+EMP+RD
Sbjct: 236 EGLRVAWELFEEMPKRD 252
Score = 57.4 bits (137), Expect = 1e-06
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
A LFN+ RDVV W M+ G K G+ A+ LFD+MPER++ S N M+ + + G++
Sbjct: 272 AHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHL 331
Query: 44 DSARILFDEMPER 6
A F +M R
Sbjct: 332 MEALNFFHDMLSR 344
>emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 86.7 bits (213), Expect = 2e-15
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
A +LF RD++ WN+MI G VKCG+ +A LF+ MP+R++ SW M+D + K+G I
Sbjct: 297 AWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEI 356
Query: 44 DSARILFDEMPERD 3
D AR LFDEMPERD
Sbjct: 357 DIARGLFDEMPERD 370
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMP--ERNISSWNTMIDMHCKM- 54
ARQLF+R RD V +N+MI G VK G A++LFD MP ++N+ SWN+MI + +
Sbjct: 232 ARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSE 291
Query: 53 GNIDSARILFDEMPERD 3
+ A LF+EMP+RD
Sbjct: 292 EGLRVAWELFEEMPKRD 308
Score = 55.8 bits (133), Expect = 3e-06
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
A LFN RDVV W M+ G K G+ A+ LFD+MPER++ S N M+ + + G +
Sbjct: 328 AHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGXL 387
Query: 44 DSARILFDEM 15
A F +M
Sbjct: 388 MEALXFFHDM 397
>ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 86.3 bits (212), Expect = 2e-15
Identities = 39/74 (52%), Positives = 51/74 (68%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
A ++F ++ V WN MI G V+ Q A++LFDQMP RN SSWNTM+ + + GNI
Sbjct: 296 ATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNI 355
Query: 44 DSARILFDEMPERD 3
D A+ILFDEMP+RD
Sbjct: 356 DQAKILFDEMPQRD 369
Score = 68.6 bits (166), Expect = 5e-10
Identities = 30/74 (40%), Positives = 49/74 (66%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
A +FN R V +N MI+G + +F A+ +F++MP+R++ SWN M+ + K GN+
Sbjct: 79 ALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNL 138
Query: 44 DSARILFDEMPERD 3
+AR LF++MPE+D
Sbjct: 139 SAARALFNQMPEKD 152
Score = 68.2 bits (165), Expect = 7e-10
Identities = 29/70 (41%), Positives = 47/70 (67%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
AR++F + RD++ WN M++G VK G A+ LF+QMPE+++ SWN M+ + G +
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFV 169
Query: 44 DSARILFDEM 15
+ AR +FD+M
Sbjct: 170 EEARKIFDQM 179
Score = 65.9 bits (159), Expect = 3e-09
Identities = 29/74 (39%), Positives = 47/74 (63%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
AR LF+R RD + WN MITG + G +A+ LF+++P R++ +W M+ + G +
Sbjct: 234 ARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGML 293
Query: 44 DSARILFDEMPERD 3
D A +F+EMPE++
Sbjct: 294 DEATRIFEEMPEKN 307
Score = 63.5 bits (153), Expect = 2e-08
Identities = 31/74 (41%), Positives = 47/74 (63%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
AR+LF+ ++V WN ++ G V+ + DA+ LFD+MP R+ SWN MI + + G +
Sbjct: 203 ARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLL 262
Query: 44 DSARILFDEMPERD 3
AR LF+E+P RD
Sbjct: 263 SEARRLFEELPIRD 276
Score = 63.2 bits (152), Expect = 2e-08
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
AR+LF++ R+ WNTM+TG +CG A+ LFD+MP+R+ SW MI + + G
Sbjct: 327 ARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQS 386
Query: 44 DSARILFDEM 15
+ A LF +M
Sbjct: 387 EEALHLFIKM 396
Score = 62.4 bits (150), Expect = 4e-08
Identities = 29/68 (42%), Positives = 43/68 (63%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
AR LFN+ +DVV WN M++G + G +A+ +FDQM +N SWN ++ + + G I
Sbjct: 141 ARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRI 200
Query: 44 DSARILFD 21
+ AR LFD
Sbjct: 201 EDARRLFD 208
Score = 57.8 bits (138), Expect = 9e-07
Identities = 26/74 (35%), Positives = 45/74 (60%)
Frame = -1
Query: 224 ARQLFNRAHPRDVVLWNTMITGLVKCGQFHDAQDLFDQMPERNISSWNTMIDMHCKMGNI 45
AR++F++ ++ + WN +++ V+ G+ DA+ LFD + I SWN ++ + + +
Sbjct: 172 ARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRL 231
Query: 44 DSARILFDEMPERD 3
D AR LFD MP RD
Sbjct: 232 DDARSLFDRMPVRD 245