BLASTX nr result

ID: Dioscorea21_contig00026995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026995
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_004136720.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
emb|CBI39664.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]   110   2e-22

>ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/104 (51%), Positives = 75/104 (72%)
 Frame = -3

Query: 315 SISTCNVLLKNLVSNKGDLQLVLFVYKEMVKTGTLPNIETLNCLIKALLESEWIDLALEQ 136
           SI   N +L  LV  K   Q V+FVYKEMVK G  P+I+TLN L++ L E++ +D AL+Q
Sbjct: 161 SIDVFNFVLGALVEEKRGFQDVVFVYKEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQ 220

Query: 135 FHRMNKKNCEPNTQTFEIVIGGLCSSGRVDEAIMFLNQMLEVGC 4
           + R+NKK C PN++TFEIVI GL +  RVD+++  L++MLE+GC
Sbjct: 221 YRRINKKGCIPNSRTFEIVIKGLIAKNRVDDSVTILHEMLELGC 264


>ref|XP_004136720.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Cucumis sativus]
           gi|449501182|ref|XP_004161300.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g63330-like [Cucumis sativus]
          Length = 728

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/106 (50%), Positives = 72/106 (67%)
 Frame = -3

Query: 321 RISISTCNVLLKNLVSNKGDLQLVLFVYKEMVKTGTLPNIETLNCLIKALLESEWIDLAL 142
           R S+ T NV+L  LV    D+Q VLFVYKEMVK G +PN++TLN L+ AL  +E I  A+
Sbjct: 162 RPSVETFNVVLAVLVEEDRDIQEVLFVYKEMVKAGIVPNVDTLNFLLAALFHAEQIKTAM 221

Query: 141 EQFHRMNKKNCEPNTQTFEIVIGGLCSSGRVDEAIMFLNQMLEVGC 4
            QF RM KK C PN++TFE+++ GL +   VDEA++ L  M ++ C
Sbjct: 222 NQFRRMRKKGCSPNSKTFEVLVNGLITKNLVDEAVLVLGIMYKIRC 267


>emb|CBI39664.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/107 (47%), Positives = 77/107 (71%)
 Frame = -3

Query: 324 HRISISTCNVLLKNLVSNKGDLQLVLFVYKEMVKTGTLPNIETLNCLIKALLESEWIDLA 145
           ++ SI   N LL  LV  + D + +L VYKE+VK G +PN++TLN LI+AL E  WIDLA
Sbjct: 140 YKFSIIEFNGLLGALVRERRDFREILLVYKEIVKAGIVPNVDTLNYLIEALFELNWIDLA 199

Query: 144 LEQFHRMNKKNCEPNTQTFEIVIGGLCSSGRVDEAIMFLNQMLEVGC 4
           L+Q+ RM+KK C PN++TF+I+I GL +   V+++++ L +M+E+ C
Sbjct: 200 LDQYRRMSKKGCSPNSKTFDILISGLIARNLVEKSVVVLGEMIELEC 246


>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/107 (47%), Positives = 77/107 (71%)
 Frame = -3

Query: 324 HRISISTCNVLLKNLVSNKGDLQLVLFVYKEMVKTGTLPNIETLNCLIKALLESEWIDLA 145
           ++ SI   N LL  LV  + D + +L VYKE+VK G +PN++TLN LI+AL E  WIDLA
Sbjct: 163 YKFSIIEFNGLLGALVRERRDFREILLVYKEIVKAGIVPNVDTLNYLIEALFELNWIDLA 222

Query: 144 LEQFHRMNKKNCEPNTQTFEIVIGGLCSSGRVDEAIMFLNQMLEVGC 4
           L+Q+ RM+KK C PN++TF+I+I GL +   V+++++ L +M+E+ C
Sbjct: 223 LDQYRRMSKKGCSPNSKTFDILISGLIARNLVEKSVVVLGEMIELEC 269


>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/107 (47%), Positives = 77/107 (71%)
 Frame = -3

Query: 324 HRISISTCNVLLKNLVSNKGDLQLVLFVYKEMVKTGTLPNIETLNCLIKALLESEWIDLA 145
           ++ SI   N LL  LV  + D + +L VYKE+VK G +PN++TLN LI+AL E  WIDLA
Sbjct: 163 YKFSIIEFNGLLGALVRERRDFREILLVYKEIVKAGIVPNVDTLNYLIEALFELNWIDLA 222

Query: 144 LEQFHRMNKKNCEPNTQTFEIVIGGLCSSGRVDEAIMFLNQMLEVGC 4
           L+Q+ RM+KK C PN++TF+I+I GL +   V+++++ L +M+E+ C
Sbjct: 223 LDQYRRMSKKGCSPNSKTFDILISGLIARNLVEKSVVVLGEMIELEC 269


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