BLASTX nr result
ID: Dioscorea21_contig00026977
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00026977 (245 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002299599.1| predicted protein [Populus trichocarpa] gi|2... 65 4e-09 ref|XP_002304146.1| predicted protein [Populus trichocarpa] gi|2... 65 7e-09 ref|XP_002460288.1| hypothetical protein SORBIDRAFT_02g026020 [S... 60 1e-07 gb|AAD25792.1|AC006577_28 F15I1.28, partial [Arabidopsis thaliana] 57 1e-06 ref|XP_002891794.1| predicted protein [Arabidopsis lyrata subsp.... 57 1e-06 >ref|XP_002299599.1| predicted protein [Populus trichocarpa] gi|222846857|gb|EEE84404.1| predicted protein [Populus trichocarpa] Length = 170 Score = 65.5 bits (158), Expect = 4e-09 Identities = 44/115 (38%), Positives = 55/115 (47%), Gaps = 38/115 (33%) Frame = -3 Query: 240 EDDVGAVSGAGTPR-RLAMKALTTQIREMAIRASGAYRQCKPCS---------------- 112 E+DV V+ TPR + A+KALT QI++MA++ASGAYR CKPCS Sbjct: 22 EEDVD-VAALETPRTKQAIKALTAQIKDMAVKASGAYRNCKPCSGSSNNNSNRNYAESDA 80 Query: 111 ---------------------RAWERRECTESEGLESGNGTPASMSGRTEESASM 10 R W + +GL G GTPAS+SGRTE A M Sbjct: 81 ASDSARFHCSYRRTGSSNSTPRMWGKEMEARLKGLSGGEGTPASVSGRTESVAFM 135 >ref|XP_002304146.1| predicted protein [Populus trichocarpa] gi|222841578|gb|EEE79125.1| predicted protein [Populus trichocarpa] Length = 170 Score = 64.7 bits (156), Expect = 7e-09 Identities = 40/114 (35%), Positives = 51/114 (44%), Gaps = 37/114 (32%) Frame = -3 Query: 240 EDDVGAVSGAGTPRRLAMKALTTQIREMAIRASGAYRQCKPCS----------------- 112 E+DV + + AMKALT Q+++MA++ASGAYR CKPCS Sbjct: 22 EEDVDVAAFETLRTKHAMKALTAQMKDMAVKASGAYRNCKPCSGSSSNNNNRNYAESDAA 81 Query: 111 --------------------RAWERRECTESEGLESGNGTPASMSGRTEESASM 10 R W + +GL SG GTPAS+SGRTE M Sbjct: 82 SDSARFHCLYRRAGSSNSTPRKWGKESEARLKGLSSGEGTPASVSGRTESVVFM 135 >ref|XP_002460288.1| hypothetical protein SORBIDRAFT_02g026020 [Sorghum bicolor] gi|241923665|gb|EER96809.1| hypothetical protein SORBIDRAFT_02g026020 [Sorghum bicolor] Length = 416 Score = 60.5 bits (145), Expect = 1e-07 Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 6/50 (12%) Frame = -3 Query: 243 PEDDV-----GAVSGAGTPR-RLAMKALTTQIREMAIRASGAYRQCKPCS 112 PEDD GA+ GAGTP R A+KALT QI++MA++ASGAYR CKPC+ Sbjct: 24 PEDDDVVDGGGAIGGAGTPSTRHAIKALTAQIKDMALKASGAYRHCKPCA 73 >gb|AAD25792.1|AC006577_28 F15I1.28, partial [Arabidopsis thaliana] Length = 169 Score = 57.4 bits (137), Expect = 1e-06 Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 38/105 (36%) Frame = -3 Query: 210 GTPR-RLAMKALTTQIREMAIRASGAYRQCKPCS-------------------------- 112 GTPR + A+K+LT+Q+++MA++ASGAY+ CKPCS Sbjct: 30 GTPRTKQAIKSLTSQLKDMAVKASGAYKNCKPCSGTTNRNQNRNYADSDAASDSGRFHYS 89 Query: 111 -----------RAWERRECTESEGLESGNGTPASMSGRTEESASM 10 + W + +G+ S GTP SMSGRTE M Sbjct: 90 YQRAGTATSTPKIWGNEMESRLKGISSEEGTPTSMSGRTESIVFM 134 >ref|XP_002891794.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297337636|gb|EFH68053.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 345 Score = 57.4 bits (137), Expect = 1e-06 Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 38/105 (36%) Frame = -3 Query: 210 GTPR-RLAMKALTTQIREMAIRASGAYRQCKPCS-------------------------- 112 GTPR + A+K+LT+Q+++MA++ASGAY+ CKPCS Sbjct: 30 GTPRTKQAIKSLTSQLKDMAVKASGAYKNCKPCSGTSNRNQNRNYADSDVASDSGRFHYA 89 Query: 111 -----------RAWERRECTESEGLESGNGTPASMSGRTEESASM 10 + W + +GL S GTP SMSGRTE M Sbjct: 90 YQRAGTASSTPKIWGNDMESRLKGLSSEEGTPTSMSGRTESIVFM 134