BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026976
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK03390.1| predicted protein [Hordeum vulgare subsp. vulgare]    226   3e-87
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   214   8e-87
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   215   2e-86
ref|XP_003574205.1| PREDICTED: DNA excision repair protein ERCC-...   221   3e-86
gb|ACG48134.1| mating-type switching protein swi10 [Zea mays]         218   2e-85

>dbj|BAK03390.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 388

 Score =  226 bits (575), Expect(2) = 3e-87
 Identities = 121/219 (55%), Positives = 140/219 (63%), Gaps = 15/219 (6%)
 Frame = -3

Query: 938 MEKERGNDR----KTLIQIPSYQEVF-----------QPSSSSAPQXXXXXXXXXXXXXX 804
           M+ E+G  R    K LI+IPSYQEVF            PSS + P               
Sbjct: 1   MDGEQGRQRPDSGKNLIKIPSYQEVFGNGAAASSSSSTPSSYNPPLPSAAAAAAGSSSSS 60

Query: 803 XXSDAFSFIKASEFYTXXXXXXXXXXXXXXXXXXXXXXXPQNRNAILVSQRQKGNPLLKH 624
             S+AFSF+K+SEFY+                        Q++N+ILVS RQKGNPLLKH
Sbjct: 61  SFSEAFSFLKSSEFYSPPPPPPQPSTSPRPPLAGATTTPSQSKNSILVSNRQKGNPLLKH 120

Query: 623 IRNVRWVFADIIPDYLMGQGSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRXXXXXXXX 444
           IRN RW FADI+PDY++GQ SCALY+SLRYHLLHPDYLY+RIRELQKNFKLR        
Sbjct: 121 IRNARWTFADIVPDYVIGQSSCALYISLRYHLLHPDYLYYRIRELQKNFKLRVILCHIDI 180

Query: 443 XXXVKPLLEVTRTAMLHDCTLLCGWSLEECGRYLETIKV 327
              VKPL E+TRT++LHDCTLLCGWSLEECGRYLETIKV
Sbjct: 181 EDVVKPLHEITRTSLLHDCTLLCGWSLEECGRYLETIKV 219



 Score =  123 bits (309), Expect(2) = 3e-87
 Identities = 59/71 (83%), Positives = 65/71 (91%)
 Frame = -1

Query: 214 ADSIREQMDTDYLSRLTHALTTVRHVNKTDVVTLGSAFGSLSGIMDASMEDLARCPGIGE 35
           ADSIRE  D DYLSR THALT++R VNKTDV+TLGS+FGSLS IMDASME+LARCPGIGE
Sbjct: 225 ADSIREHTDNDYLSRFTHALTSIRRVNKTDVITLGSSFGSLSRIMDASMEELARCPGIGE 284

Query: 34  RKVKRLYDTFH 2
           RKVKRL+DTFH
Sbjct: 285 RKVKRLHDTFH 295


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
           communis] gi|223548305|gb|EEF49796.1| excision repair
           cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  214 bits (545), Expect(2) = 8e-87
 Identities = 119/219 (54%), Positives = 136/219 (62%), Gaps = 12/219 (5%)
 Frame = -3

Query: 947 QQQMEKERGNDR----KTLIQIPSYQEVFQPSSSSAPQXXXXXXXXXXXXXXXXSDAFSF 780
           +QQ E+ER N +    K +IQIPSYQEV + S +   +                  AFSF
Sbjct: 5   EQQEEEERSNRKSNAKKVVIQIPSYQEVIESSQNPKTESLFKPSQTFS-------QAFSF 57

Query: 779 IKASEFYTXXXXXXXXXXXXXXXXXXXXXXXPQN--------RNAILVSQRQKGNPLLKH 624
           IK SEFYT                       P          RN+ILVS RQKGNPLLKH
Sbjct: 58  IKDSEFYTPPPQSSAVSNNANSIQTTQSVPSPSQSVALTGNYRNSILVSHRQKGNPLLKH 117

Query: 623 IRNVRWVFADIIPDYLMGQGSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRXXXXXXXX 444
           IRNVRW FAD++ DYL+GQ  C+LYLSLRYHLLHPDYLY+RIRELQKN+KLR        
Sbjct: 118 IRNVRWAFADVVCDYLLGQNCCSLYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCHVDV 177

Query: 443 XXXVKPLLEVTRTAMLHDCTLLCGWSLEECGRYLETIKV 327
              VKPLLEVT+TA+LHDCTLLC WSLEECGRYLETIK+
Sbjct: 178 EDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKM 216



 Score =  133 bits (335), Expect(2) = 8e-87
 Identities = 65/71 (91%), Positives = 67/71 (94%)
 Frame = -1

Query: 214 ADSIREQMDTDYLSRLTHALTTVRHVNKTDVVTLGSAFGSLSGIMDASMEDLARCPGIGE 35
           AD I+ QMDTDYLSRLTHALTT+RHVNKTDVVTLGS FGSLS IMDASMEDLARCPGIGE
Sbjct: 222 ADLIQGQMDTDYLSRLTHALTTIRHVNKTDVVTLGSTFGSLSNIMDASMEDLARCPGIGE 281

Query: 34  RKVKRLYDTFH 2
           RKVKRLYDTFH
Sbjct: 282 RKVKRLYDTFH 292


>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
           gi|296088298|emb|CBI36743.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  215 bits (548), Expect(2) = 2e-86
 Identities = 119/220 (54%), Positives = 135/220 (61%), Gaps = 13/220 (5%)
 Frame = -3

Query: 947 QQQMEKERGNDRKTLIQIPSYQEVFQPSSSSAPQXXXXXXXXXXXXXXXXSDAFSFIKAS 768
           Q++ + E+ N    +I+IPSYQEV + S S                      AFSF+K+S
Sbjct: 9   QRERDDEKKNKSSIVIKIPSYQEVLESSQSKTTSSLFTPSPSFS-------QAFSFVKSS 61

Query: 767 EFYTXXXXXXXXXXXXXXXXXXXXXXXP-------------QNRNAILVSQRQKGNPLLK 627
           + YT                       P             Q+RNAILVS RQKGNPLLK
Sbjct: 62  QSYTPPPPATPPPPPPPSSRQVEQLEAPSSSSSSPSLSRSAQSRNAILVSHRQKGNPLLK 121

Query: 626 HIRNVRWVFADIIPDYLMGQGSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRXXXXXXX 447
           HIRNVRW FADI+ DYL+GQ SCALYLSLRYHLLHPDYLY+RIRELQKNFKLR       
Sbjct: 122 HIRNVRWDFADIVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVD 181

Query: 446 XXXXVKPLLEVTRTAMLHDCTLLCGWSLEECGRYLETIKV 327
               +KPLLEVTRTA+LHDCTLLC WSLEECGRYLETIKV
Sbjct: 182 VEDVIKPLLEVTRTALLHDCTLLCAWSLEECGRYLETIKV 221



 Score =  130 bits (328), Expect(2) = 2e-86
 Identities = 65/71 (91%), Positives = 66/71 (92%)
 Frame = -1

Query: 214 ADSIREQMDTDYLSRLTHALTTVRHVNKTDVVTLGSAFGSLSGIMDASMEDLARCPGIGE 35
           AD I+ Q DTDYLSRLTHALTTVRHVNKTDVVTLGS FGSLS IMDASMEDLARCPGIGE
Sbjct: 227 ADIIQGQTDTDYLSRLTHALTTVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGE 286

Query: 34  RKVKRLYDTFH 2
           RKVKRLYDTFH
Sbjct: 287 RKVKRLYDTFH 297


>ref|XP_003574205.1| PREDICTED: DNA excision repair protein ERCC-1-like [Brachypodium
           distachyon]
          Length = 391

 Score =  221 bits (562), Expect(2) = 3e-86
 Identities = 122/218 (55%), Positives = 140/218 (64%), Gaps = 14/218 (6%)
 Frame = -3

Query: 938 MEKERGNDR----KTLIQIPSYQEVF------QPSSSSAPQXXXXXXXXXXXXXXXXS-- 795
           M+ E+G+ R    K LI+IPSYQEVF        SSSS P                 S  
Sbjct: 1   MDGEQGHQRPVSSKNLIKIPSYQEVFGNGVSSSSSSSSKPPSYNPTLPSAAVGSSSASSS 60

Query: 794 --DAFSFIKASEFYTXXXXXXXXXXXXXXXXXXXXXXXPQNRNAILVSQRQKGNPLLKHI 621
             +AFSF+K+SEFY+                        Q++N ILVS RQKGNPLLKHI
Sbjct: 61  FSEAFSFLKSSEFYSPPPPPPHPSTAPRPPLAGPSRPAVQSKNTILVSNRQKGNPLLKHI 120

Query: 620 RNVRWVFADIIPDYLMGQGSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRXXXXXXXXX 441
           RN RW FADI+PDY++GQ SCALY+SLRYHLLHPDYLY+RIRELQK+FKLR         
Sbjct: 121 RNARWSFADIVPDYVIGQSSCALYISLRYHLLHPDYLYYRIRELQKDFKLRVILCHIDIE 180

Query: 440 XXVKPLLEVTRTAMLHDCTLLCGWSLEECGRYLETIKV 327
             VKPL EVTRT++LHDCTLLCGWSLEECGRYLETIKV
Sbjct: 181 DVVKPLHEVTRTSLLHDCTLLCGWSLEECGRYLETIKV 218



 Score =  125 bits (313), Expect(2) = 3e-86
 Identities = 60/71 (84%), Positives = 65/71 (91%)
 Frame = -1

Query: 214 ADSIREQMDTDYLSRLTHALTTVRHVNKTDVVTLGSAFGSLSGIMDASMEDLARCPGIGE 35
           ADSIRE  D DYLSRLTHALT++R VNKTDVVTLGS FGSLS IMD+SME+LARCPGIGE
Sbjct: 224 ADSIREHTDNDYLSRLTHALTSIRRVNKTDVVTLGSTFGSLSRIMDSSMEELARCPGIGE 283

Query: 34  RKVKRLYDTFH 2
           RKVKR+YDTFH
Sbjct: 284 RKVKRIYDTFH 294


>gb|ACG48134.1| mating-type switching protein swi10 [Zea mays]
          Length = 396

 Score =  218 bits (554), Expect(2) = 2e-85
 Identities = 116/218 (53%), Positives = 137/218 (62%), Gaps = 11/218 (5%)
 Frame = -3

Query: 947 QQQMEKERGNDRKTLIQIPSYQEVF---QPSSSSAPQXXXXXXXXXXXXXXXXSD----- 792
           ++Q         K LI+IPSYQEVF     SSSS P                 S      
Sbjct: 5   REQQAPPESQPGKNLIKIPSYQEVFGTGASSSSSKPPSYNPPVATSAAAAASSSSSSSGS 64

Query: 791 ---AFSFIKASEFYTXXXXXXXXXXXXXXXXXXXXXXXPQNRNAILVSQRQKGNPLLKHI 621
              AFSF+K+SEFY+                       PQ++N+ILVS RQ+GNPLLKHI
Sbjct: 65  FSQAFSFLKSSEFYSPPPPPPQPTTTPRPTQASPSAPTPQSKNSILVSHRQRGNPLLKHI 124

Query: 620 RNVRWVFADIIPDYLMGQGSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRXXXXXXXXX 441
           RN RW FAD++PDY++GQ SCALYLS+RYHLLHPDYLY+RIRE+QKNF+LR         
Sbjct: 125 RNARWTFADVVPDYVLGQSSCALYLSIRYHLLHPDYLYYRIREMQKNFRLRVILCHVDVE 184

Query: 440 XXVKPLLEVTRTAMLHDCTLLCGWSLEECGRYLETIKV 327
             +KPL E+TRTA+LHDCTLLCGWSLEECGRYLETIKV
Sbjct: 185 DVIKPLHEITRTALLHDCTLLCGWSLEECGRYLETIKV 222



 Score =  125 bits (314), Expect(2) = 2e-85
 Identities = 59/71 (83%), Positives = 66/71 (92%)
 Frame = -1

Query: 214 ADSIREQMDTDYLSRLTHALTTVRHVNKTDVVTLGSAFGSLSGIMDASMEDLARCPGIGE 35
           ADSIRE MD DYLSRLTH LT++RHVNKTDVVTLGS+FGSLS IM+ SM++LARCPGIGE
Sbjct: 228 ADSIREHMDNDYLSRLTHGLTSIRHVNKTDVVTLGSSFGSLSQIMNGSMDELARCPGIGE 287

Query: 34  RKVKRLYDTFH 2
           RKV+RLYDTFH
Sbjct: 288 RKVRRLYDTFH 298