BLASTX nr result

ID: Dioscorea21_contig00026964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026964
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN70877.1| NBS-type RGA protein, partial [Thyrsostachys siam...    56   3e-06
ref|XP_002461351.1| hypothetical protein SORBIDRAFT_02g001410 [S...    56   3e-06
ref|NP_001046563.1| Os02g0282000 [Oryza sativa Japonica Group] g...    55   8e-06
gb|EEE56740.1| hypothetical protein OsJ_06263 [Oryza sativa Japo...    55   8e-06
gb|EEC72921.1| hypothetical protein OsI_06761 [Oryza sativa Indi...    55   8e-06

>gb|AFN70877.1| NBS-type RGA protein, partial [Thyrsostachys siamensis]
          Length = 236

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/67 (50%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -3

Query: 449 GKLKGSPLAIKTVGRLLSSCLTEKHWKGVLEGVLESDLWELKT--HAVMSMKHLRYLYLE 276
           GKLKGSPLA KTVGRLL   LT  HW      VL S  WEL+T  H +M    L Y+YL 
Sbjct: 166 GKLKGSPLAAKTVGRLLRKNLTLDHW----TRVLASKAWELQTGGHEIMPALKLSYVYLP 221

Query: 275 IQAYTIF 255
                 F
Sbjct: 222 FHLQKCF 228


>ref|XP_002461351.1| hypothetical protein SORBIDRAFT_02g001410 [Sorghum bicolor]
           gi|241924728|gb|EER97872.1| hypothetical protein
           SORBIDRAFT_02g001410 [Sorghum bicolor]
          Length = 873

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/61 (49%), Positives = 37/61 (60%)
 Frame = -3

Query: 446 KLKGSPLAIKTVGRLLSSCLTEKHWKGVLEGVLESDLWELKTHAVMSMKHLRYLYLEIQA 267
           KLKGSPLA KTVGRLL   L   HW    +G+L S LWEL+  A   +  LR  Y+ + +
Sbjct: 371 KLKGSPLAAKTVGRLLGMSLDLAHW----DGILMSQLWELRQDATDILPALRLSYMYLPS 426

Query: 266 Y 264
           Y
Sbjct: 427 Y 427


>ref|NP_001046563.1| Os02g0282000 [Oryza sativa Japonica Group]
           gi|47848562|dbj|BAD22413.1| putative disease resistance
           protein I2 [Oryza sativa Japonica Group]
           gi|113536094|dbj|BAF08477.1| Os02g0282000 [Oryza sativa
           Japonica Group]
          Length = 1185

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
 Frame = -3

Query: 446 KLKGSPLAIKTVGRLLSSCLTEKHWKGVLEGVLESDLWELKTH--AVMSMKHLRYLYL 279
           KLKGSPLA KT+GRLL + L   HW      +L+S+LWEL+ H   ++    L YLYL
Sbjct: 419 KLKGSPLAAKTLGRLLRTSLDIAHW----NNILQSELWELRQHNTEILPALRLSYLYL 472


>gb|EEE56740.1| hypothetical protein OsJ_06263 [Oryza sativa Japonica Group]
          Length = 1159

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
 Frame = -3

Query: 446 KLKGSPLAIKTVGRLLSSCLTEKHWKGVLEGVLESDLWELKTH--AVMSMKHLRYLYL 279
           KLKGSPLA KT+GRLL + L   HW      +L+S+LWEL+ H   ++    L YLYL
Sbjct: 393 KLKGSPLAAKTLGRLLRTSLDIAHW----NNILQSELWELRQHNTEILPALRLSYLYL 446


>gb|EEC72921.1| hypothetical protein OsI_06761 [Oryza sativa Indica Group]
          Length = 1159

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
 Frame = -3

Query: 446 KLKGSPLAIKTVGRLLSSCLTEKHWKGVLEGVLESDLWELKTH--AVMSMKHLRYLYL 279
           KLKGSPLA KT+GRLL + L   HW      +L+S+LWEL+ H   ++    L YLYL
Sbjct: 393 KLKGSPLAAKTLGRLLRTSLDIAHW----NNILQSELWELRQHNTEILPALRLSYLYL 446


Top