BLASTX nr result

ID: Dioscorea21_contig00026958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026958
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...   129   1e-33
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo...   121   6e-30
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza...   121   6e-30
ref|XP_003606229.1| FAR1-related protein [Medicago truncatula] g...   119   3e-28
ref|XP_003576263.1| PREDICTED: protein FAR1-RELATED SEQUENCE 2-l...    95   1e-22

>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
           truncatula]
          Length = 1116

 Score =  129 bits (324), Expect(2) = 1e-33
 Identities = 55/99 (55%), Positives = 79/99 (79%)
 Frame = -1

Query: 298 KMQQKMDTYVKRRLELNDQACIGLSKNFHSLAVENGGYENLTYTEKDCRNYIARARQFRL 119
           +  + +D + KRRL++NDQA I +S+NF S+ VE  GY+NLT+ EKDCRNYI +AR+ RL
Sbjct: 458 RCNKNLDPHTKRRLDINDQAGINVSRNFRSMVVEANGYDNLTFGEKDCRNYIDKARRLRL 517

Query: 118 GVGDAEALGNYFSRMQRRNPNFFHLIDMDEEGRLKNVFW 2
           G GDAEA+ NYF RMQ++N  F++++D+D++ RL+NVFW
Sbjct: 518 GTGDAEAIQNYFVRMQKKNSQFYYVMDVDDKSRLRNVFW 556



 Score = 38.9 bits (89), Expect(2) = 1e-33
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = -2

Query: 372 DGHFMISRMHFEHNHALSPQQSRFKKCNK 286
           DG   I+++  EHNH LSP +SR+ +CNK
Sbjct: 433 DGKITITKVALEHNHGLSPTKSRYFRCNK 461


>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
          Length = 965

 Score =  121 bits (303), Expect(2) = 6e-30
 Identities = 54/99 (54%), Positives = 74/99 (74%)
 Frame = -1

Query: 298 KMQQKMDTYVKRRLELNDQACIGLSKNFHSLAVENGGYENLTYTEKDCRNYIARARQFRL 119
           +  +K+D   KRRLELNDQA I ++KNF SL ++ GGYENL + EK+CRNY+   R+ +L
Sbjct: 129 RCHKKLDLQAKRRLELNDQARIRINKNFSSLVMQAGGYENLQFGEKECRNYLQDVRKLKL 188

Query: 118 GVGDAEALGNYFSRMQRRNPNFFHLIDMDEEGRLKNVFW 2
           G GDA A+  YF RM  ++PNFF+++D+DE+ RLKNV W
Sbjct: 189 GAGDAHAVYQYFLRMTSKDPNFFYVMDVDEDSRLKNVLW 227



 Score = 34.7 bits (78), Expect(2) = 6e-30
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 375 NDGHFMISRMHFEHNHALSPQQSRFKKCNKK 283
           +D  F IS +  +HNH +SP ++R  +C+KK
Sbjct: 103 HDEKFCISTLTLDHNHVVSPSKARHLRCHKK 133


>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 862

 Score =  121 bits (303), Expect(2) = 6e-30
 Identities = 54/99 (54%), Positives = 74/99 (74%)
 Frame = -1

Query: 298 KMQQKMDTYVKRRLELNDQACIGLSKNFHSLAVENGGYENLTYTEKDCRNYIARARQFRL 119
           +  +K+D   KRRLELNDQA I ++KNF SL ++ GGYENL + EK+CRNY+   R+ +L
Sbjct: 129 RCHKKLDLQAKRRLELNDQARIRINKNFSSLVMQAGGYENLQFGEKECRNYLQDVRKLKL 188

Query: 118 GVGDAEALGNYFSRMQRRNPNFFHLIDMDEEGRLKNVFW 2
           G GDA A+  YF RM  ++PNFF+++D+DE+ RLKNV W
Sbjct: 189 GAGDAHAVYQYFLRMTSKDPNFFYVMDVDEDSRLKNVLW 227



 Score = 34.7 bits (78), Expect(2) = 6e-30
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 375 NDGHFMISRMHFEHNHALSPQQSRFKKCNKK 283
           +D  F IS +  +HNH +SP ++R  +C+KK
Sbjct: 103 HDEKFCISTLTLDHNHVVSPSKARHLRCHKK 133


>ref|XP_003606229.1| FAR1-related protein [Medicago truncatula]
           gi|355507284|gb|AES88426.1| FAR1-related protein
           [Medicago truncatula]
          Length = 446

 Score =  119 bits (299), Expect(2) = 3e-28
 Identities = 50/99 (50%), Positives = 75/99 (75%)
 Frame = -1

Query: 298 KMQQKMDTYVKRRLELNDQACIGLSKNFHSLAVENGGYENLTYTEKDCRNYIARARQFRL 119
           +  + +D + KRRL++NDQA I +S+NF  + VE  GY+NLT+ EKDCRNY+ + R+ RL
Sbjct: 104 RCNKNLDPHTKRRLDINDQAGINVSRNFRYMVVEANGYDNLTFGEKDCRNYMDKVRRLRL 163

Query: 118 GVGDAEALGNYFSRMQRRNPNFFHLIDMDEEGRLKNVFW 2
           G+GD EA+ NYF  MQ +N  F++++D+D++ RL+NVFW
Sbjct: 164 GIGDVEAIQNYFVIMQMKNSQFYYVMDVDDKSRLRNVFW 202



 Score = 30.4 bits (67), Expect(2) = 3e-28
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -2

Query: 372 DGHFMISRMHFEHNHALSPQQSRFKKCNK 286
           D    I+++  EH+H LSP +S + +CNK
Sbjct: 79  DEKIAITKVALEHSHELSPTKSIYFRCNK 107


>ref|XP_003576263.1| PREDICTED: protein FAR1-RELATED SEQUENCE 2-like [Brachypodium
           distachyon]
          Length = 561

 Score = 94.7 bits (234), Expect(2) = 1e-22
 Identities = 43/84 (51%), Positives = 63/84 (75%)
 Frame = -1

Query: 298 KMQQKMDTYVKRRLELNDQACIGLSKNFHSLAVENGGYENLTYTEKDCRNYIARARQFRL 119
           +  ++++  VKRRLELND+A I ++KNF+SL V   G+ENLT+ EK+CRNY+ + R+ + 
Sbjct: 156 RCNKRLNFNVKRRLELNDRAGIRVNKNFNSLVVAADGHENLTFGEKECRNYLEKTRRLKF 215

Query: 118 GVGDAEALGNYFSRMQRRNPNFFH 47
           G GDAEA+ +YF +MQ  NP FF+
Sbjct: 216 GSGDAEAVRDYFMKMQSDNPKFFN 239



 Score = 36.6 bits (83), Expect(2) = 1e-22
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -2

Query: 372 DGHFMISRMHFEHNHALSPQQSRFKKCNKK 283
           DG F +S +  +HNH LSP  SR  +CNK+
Sbjct: 131 DGTFHLSTVISDHNHTLSPHTSRLFRCNKR 160


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