BLASTX nr result

ID: Dioscorea21_contig00026905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026905
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531955.1| conserved hypothetical protein [Ricinus comm...    79   6e-13
ref|XP_003542639.1| PREDICTED: CCR4-NOT transcription complex su...    77   3e-12
ref|XP_003571631.1| PREDICTED: CCR4-NOT transcription complex su...    76   6e-12
ref|XP_003609405.1| CCR4-NOT transcription complex subunit 10-B ...    75   1e-11
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...    74   3e-11

>ref|XP_002531955.1| conserved hypothetical protein [Ricinus communis]
           gi|223528401|gb|EEF30437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 851

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
 Frame = +3

Query: 3   ASEVEATSHKTTGSHGASRGAASMLTG---ANGDSKETKVNRGT-IFQXXXXXXXXXXQK 170
           A  ++ ++HK+   H       S+  G   +NGD KE K      I Q          ++
Sbjct: 607 AGSLKNSNHKSLTGHDTRASNVSVGLGQLNSNGDVKEPKGGTSQEIMQNSISYFEDIHRR 666

Query: 171 ENHMIKQAVLADLAYVELSLENPKKALAAAIRLQQLPGCSRMYNFLS 311
           EN MIKQA+LADLAYVEL LENP+KAL+AA  L +LP CSR+Y FLS
Sbjct: 667 ENQMIKQALLADLAYVELELENPEKALSAAKCLLELPECSRIYVFLS 713



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 21/88 (23%)
 Frame = +1

Query: 457 VYLLDTTDVTFPYSDEDRERWQ---------------------VDEAQGGKTLKPEEARG 573
           +Y+    +V  P+S ED E+ +                     V+E QG + LKPEEARG
Sbjct: 736 IYMSGGNNVELPFSQEDTEQLRAEKSYDYEESNGGSATAKSSSVEEPQGMEFLKPEEARG 795

Query: 574 ILYLNIATMFSIEGNSEMASQFVTKALS 657
           ILY N ATM++ +G  E A  FV++ALS
Sbjct: 796 ILYTNFATMYAAQGEIERAHHFVSQALS 823


>ref|XP_003542639.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Glycine
           max]
          Length = 859

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 49/108 (45%), Positives = 62/108 (57%), Gaps = 7/108 (6%)
 Frame = +3

Query: 6   SEVEATSHKTT-GSHGASRGAASMLTG-----ANGDSKETK-VNRGTIFQXXXXXXXXXX 164
           SEV  + +     SHG    A S+  G     ANGD+KE K VN   + Q          
Sbjct: 593 SEVSPSKNSNIKNSHGIDSKAFSVAVGLGQVNANGDTKEQKGVNSQELVQNSLSCYENVR 652

Query: 165 QKENHMIKQAVLADLAYVELSLENPKKALAAAIRLQQLPGCSRMYNFL 308
            +EN ++KQAVLA+LAYVEL L+NP KAL+ A  L +LP CSR+Y FL
Sbjct: 653 NRENQLVKQAVLANLAYVELELDNPVKALSVAKSLLELPECSRIYIFL 700


>ref|XP_003571631.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like
           [Brachypodium distachyon]
          Length = 817

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 47/91 (51%), Positives = 53/91 (58%)
 Frame = +3

Query: 42  SHGASRGAASMLTGANGDSKETKVNRGTIFQXXXXXXXXXXQKENHMIKQAVLADLAYVE 221
           S    +G  S    ANGD K       T+ Q          +KEN  IKQAVLADLA+VE
Sbjct: 575 SEAKGQGLKSAQANANGDQKGMTGFNITL-QNSIASYEEICRKENLEIKQAVLADLAFVE 633

Query: 222 LSLENPKKALAAAIRLQQLPGCSRMYNFLSR 314
           L LENP +AL+ A  LQQLP CSRMY FLSR
Sbjct: 634 LCLENPSRALSVAKLLQQLPDCSRMYVFLSR 664


>ref|XP_003609405.1| CCR4-NOT transcription complex subunit 10-B [Medicago truncatula]
           gi|355510460|gb|AES91602.1| CCR4-NOT transcription
           complex subunit 10-B [Medicago truncatula]
          Length = 881

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
 Frame = +3

Query: 42  SHGASRGAASMLTG-----ANGDSKETKVNRGT-IFQXXXXXXXXXXQKENHMIKQAVLA 203
           SHGA   A S+        +NGD+KE K      +FQ          +++N ++KQAVLA
Sbjct: 604 SHGADSKAFSVAVAVGQVNSNGDTKEQKGGASQELFQNSLSYYEDVCRRDNQLVKQAVLA 663

Query: 204 DLAYVELSLENPKKALAAAIRLQQLPGCSRMYNFL 308
           +LAYVEL L+NP KALAAA  L +LP CSR+Y FL
Sbjct: 664 NLAYVELELDNPVKALAAAKSLFELPECSRIYIFL 698


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
           vinifera]
          Length = 857

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
 Frame = +3

Query: 3   ASEVEATSHKTTGSHGASRGAASMLT------GANGDSKETKVNRG-TIFQXXXXXXXXX 161
           +SEV +  +    +   S   AS +T       ANGD+KE K     TI Q         
Sbjct: 590 SSEVVSAKNSNHKNLAGSDSKASNITVGLGQVNANGDAKEQKGGPSLTILQSSIAVYEDI 649

Query: 162 XQKENHMIKQAVLADLAYVELSLENPKKALAAAIRLQQLPGCSRMYNFL 308
            ++EN MIKQA LA+LAYVEL L+NP KAL+ A  L +LP CSR++ FL
Sbjct: 650 CRRENQMIKQATLANLAYVELELQNPLKALSTAWSLLKLPDCSRIFTFL 698



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 21/87 (24%)
 Frame = +1

Query: 460 YLLDTTDVTFPYSDEDRERWQ---------------------VDEAQGGKTLKPEEARGI 576
           YL    +V  PYS+EDRE+W+                     +++ QG   LKPEEARG 
Sbjct: 723 YLSGGNNVELPYSEEDREQWRAEKTMDCEEVNGGSLTGKNPSLEDLQGITFLKPEEARGT 782

Query: 577 LYLNIATMFSIEGNSEMASQFVTKALS 657
           LY N+ATM +++G  E A QFV +ALS
Sbjct: 783 LYANLATMSAMQGELEQARQFVKQALS 809


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