BLASTX nr result
ID: Dioscorea21_contig00026898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00026898
(498 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAH67767.1| H0322F07.4 [Oryza sativa Indica Group] gi|125550... 169 2e-40
ref|NP_001054227.1| Os04g0672700 [Oryza sativa Japonica Group] g... 167 8e-40
gb|AFW59852.1| putative pentatricopeptide repeat family protein ... 165 3e-39
gb|AEV41088.1| putative pentatricopeptide [Oryza minuta] 164 9e-39
gb|AEV41041.1| putative pentatricopeptide [Oryza minuta] 164 9e-39
>emb|CAH67767.1| H0322F07.4 [Oryza sativa Indica Group] gi|125550186|gb|EAY96008.1|
hypothetical protein OsI_17879 [Oryza sativa Indica
Group]
Length = 719
Score = 169 bits (428), Expect = 2e-40
Identities = 88/167 (52%), Positives = 112/167 (67%), Gaps = 1/167 (0%)
Frame = +1
Query: 1 VEQGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIK-SECPHDLRLHN 177
+++ L F M+ GL P+ T S VLS CG+ GD ++GR++HG V+K E D+ L N
Sbjct: 203 LDRALGQFCQMVRGGLPPTESTLSSVLSGCGRAGDCLRGRVLHGWVVKLEELDPDMPLQN 262
Query: 178 ALLDMYSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYG 357
ALLDMYSSCGD +A+ VFERIE PDLVSWN+++AG+S GDG AM FVQL+ +
Sbjct: 263 ALLDMYSSCGDLDTALRVFERIETPDLVSWNTLIAGFSGVGDGCSAMHAFVQLKAVQFDE 322
Query: 358 ALVPDEYTFXXXXXXXXXLPAICYGKAFHGQVTKAGLEDSVFVGNTL 498
+VPDEYT LPA+ GK H +V KAGLE+SVFVGNTL
Sbjct: 323 RVVPDEYTLAAVVSASATLPAMFGGKPLHAEVIKAGLENSVFVGNTL 369
Score = 75.1 bits (183), Expect = 5e-12
Identities = 43/127 (33%), Positives = 71/127 (55%)
Frame = +1
Query: 4 EQGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNAL 183
E L F SM+ +G +++ S L++ ++ L +G ++H V+KS ++ +L
Sbjct: 411 ELALMYFVSMLQEGYKVDSFSLSSALNSTTELAGLKQGEMLHAQVVKSGYEGNICASGSL 470
Query: 184 LDMYSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYGAL 363
+DMY+ G A VF I++PDL WNS++ GY + G+ +MA ++F EM R G L
Sbjct: 471 VDMYAKNGALPGAYLVFRNIQRPDLKCWNSIIGGYGNHGNSEMAFKLF---GEMIRDG-L 526
Query: 364 VPDEYTF 384
PD T+
Sbjct: 527 QPDHVTY 533
Score = 73.9 bits (180), Expect = 1e-11
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Frame = +1
Query: 13 LRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNALLDM 192
++L + + ++P +T + V+SA + + G+ +H VIK+ + + + N LL+M
Sbjct: 313 VQLKAVQFDERVVPDEYTLAAVVSASATLPAMFGGKPLHAEVIKAGLENSVFVGNTLLNM 372
Query: 193 YSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFV-QLQEMSRYGALVP 369
Y + D SA +F+ I + D++ W ++AG+S G+G++A+ FV LQE +
Sbjct: 373 YFTNDDPHSARILFDSITQKDVIMWTEMVAGHSSLGEGELALMYFVSMLQEGYKV----- 427
Query: 370 DEYTFXXXXXXXXXLPAICYGKAFHGQVTKAGLEDSVFVGNTL 498
D ++ L + G+ H QV K+G E ++ +L
Sbjct: 428 DSFSLSSALNSTTELAGLKQGEMLHAQVVKSGYEGNICASGSL 470
>ref|NP_001054227.1| Os04g0672700 [Oryza sativa Japonica Group]
gi|70663948|emb|CAE54552.2| OSJNBb0004A17.12 [Oryza
sativa Japonica Group] gi|113565798|dbj|BAF16141.1|
Os04g0672700 [Oryza sativa Japonica Group]
gi|125592028|gb|EAZ32378.1| hypothetical protein
OsJ_16588 [Oryza sativa Japonica Group]
Length = 719
Score = 167 bits (423), Expect = 8e-40
Identities = 87/167 (52%), Positives = 112/167 (67%), Gaps = 1/167 (0%)
Frame = +1
Query: 1 VEQGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIK-SECPHDLRLHN 177
+++ L F M+ GL P+ T S VLS CG+ GD ++GR++HG V+K E D+ L N
Sbjct: 203 LDRALGQFCRMVRGGLPPTESTLSSVLSGCGRAGDCLRGRVLHGWVVKLEELDPDMPLQN 262
Query: 178 ALLDMYSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYG 357
ALLDMYSSCGD +A+ VFERIE PDLVSWN+++AG+S GDG A+ FVQL+ +
Sbjct: 263 ALLDMYSSCGDLDTALRVFERIETPDLVSWNTLIAGFSGVGDGCSAVHAFVQLKAVQFDE 322
Query: 358 ALVPDEYTFXXXXXXXXXLPAICYGKAFHGQVTKAGLEDSVFVGNTL 498
+VPDEYT LPA+ GK H +V KAGLE+SVFVGNTL
Sbjct: 323 RVVPDEYTLAAVVSASATLPAMFGGKPLHAEVIKAGLENSVFVGNTL 369
Score = 77.4 bits (189), Expect = 1e-12
Identities = 44/127 (34%), Positives = 72/127 (56%)
Frame = +1
Query: 4 EQGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNAL 183
E LR F SM+ +G +++ S L++ ++ L +G ++H V+KS ++ +L
Sbjct: 411 ELALRYFVSMLQEGYKVDSFSLSSALNSTTELAGLKQGEMLHAQVVKSGYEGNICASGSL 470
Query: 184 LDMYSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYGAL 363
+DMY+ G A VF I++PDL WNS++ GY + G+ +MA ++F EM R G L
Sbjct: 471 VDMYAKNGALPGAYLVFRNIQRPDLKCWNSIIGGYGNHGNSEMAFKLF---GEMIRDG-L 526
Query: 364 VPDEYTF 384
PD T+
Sbjct: 527 QPDHVTY 533
Score = 76.3 bits (186), Expect = 2e-12
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Frame = +1
Query: 13 LRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNALLDM 192
++L + + ++P +T + V+SA + + G+ +H VIK+ + + + N LL+M
Sbjct: 313 VQLKAVQFDERVVPDEYTLAAVVSASATLPAMFGGKPLHAEVIKAGLENSVFVGNTLLNM 372
Query: 193 YSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFV-QLQEMSRYGALVP 369
Y + D SA +F+ I + D++ W ++AG+S G+G++A+R FV LQE +
Sbjct: 373 YFTNDDPHSARILFDSITQEDVIMWTEMVAGHSSLGEGELALRYFVSMLQEGYKV----- 427
Query: 370 DEYTFXXXXXXXXXLPAICYGKAFHGQVTKAGLEDSVFVGNTL 498
D ++ L + G+ H QV K+G E ++ +L
Sbjct: 428 DSFSLSSALNSTTELAGLKQGEMLHAQVVKSGYEGNICASGSL 470
>gb|AFW59852.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 554
Score = 165 bits (418), Expect = 3e-39
Identities = 88/167 (52%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
Frame = +1
Query: 1 VEQGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSE-CPHDLRLHN 177
+++ LR F M+ GL P+ T S VLS CG+ GDL GR +HG V+KSE DL LHN
Sbjct: 39 LDRALRKFCRMVSTGLAPTESTLSSVLSGCGRSGDLHHGRALHGWVVKSEELDPDLPLHN 98
Query: 178 ALLDMYSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYG 357
ALLDMY CGD +A+ VF RIE PDLVSWN++++G+S DG A++ FV+L+ +S
Sbjct: 99 ALLDMYCCCGDLDTAVLVFRRIETPDLVSWNTIISGFSGVADGWTAVQAFVKLKAVSSEW 158
Query: 358 ALVPDEYTFXXXXXXXXXLPAICYGKAFHGQVTKAGLEDSVFVGNTL 498
L PDEYTF LPA+C GK H V KAGLE SVFV NTL
Sbjct: 159 -LAPDEYTFAAVVAAAASLPAMCSGKPLHACVIKAGLESSVFVANTL 204
Score = 76.3 bits (186), Expect = 2e-12
Identities = 40/151 (26%), Positives = 78/151 (51%)
Frame = +1
Query: 46 LLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNALLDMYSSCGDNGSAI 225
L P +TF+ V++A + + G+ +H VIK+ + + N LL+MY + D SA
Sbjct: 159 LAPDEYTFAAVVAAAASLPAMCSGKPLHACVIKAGLESSVFVANTLLNMYFTNEDPESAH 218
Query: 226 SVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYGALVPDEYTFXXXXXXX 405
+F+ + D++ W ++AG+S G+G+++++ F+ + E+ D ++
Sbjct: 219 ILFDSVMVKDVIMWTEMVAGHSALGEGELSLKYFIGMLEVGHKA----DNFSLSSALNSA 274
Query: 406 XXLPAICYGKAFHGQVTKAGLEDSVFVGNTL 498
L + G+ H QV K+G E ++ V +L
Sbjct: 275 ADLAGLKQGEMLHAQVVKSGYEGNICVSGSL 305
Score = 73.2 bits (178), Expect = 2e-11
Identities = 43/127 (33%), Positives = 70/127 (55%)
Frame = +1
Query: 4 EQGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNAL 183
E L+ F M+ G N++ S L++ + L +G ++H V+KS ++ + +L
Sbjct: 246 ELSLKYFIGMLEVGHKADNFSLSSALNSAADLAGLKQGEMLHAQVVKSGYEGNICVSGSL 305
Query: 184 LDMYSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYGAL 363
+DMY+ G A SVF I+KPDL WN+++ GY + GD +MA ++F +M R L
Sbjct: 306 VDMYAKNGTLLRAYSVFCTIQKPDLKCWNAMIGGYGNHGDSEMAFKLF---GDMIR-SDL 361
Query: 364 VPDEYTF 384
PD T+
Sbjct: 362 QPDHVTY 368
>gb|AEV41088.1| putative pentatricopeptide [Oryza minuta]
Length = 760
Score = 164 bits (414), Expect = 9e-39
Identities = 88/167 (52%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
Frame = +1
Query: 1 VEQGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIK-SECPHDLRLHN 177
+++ L F M+ GL P+ T S VLS CG+ GD +GR +HG V+K E D+ L N
Sbjct: 244 LDRALGQFCRMVRGGLPPTESTLSSVLSGCGRAGDCRRGRALHGWVVKLEELDPDMPLQN 303
Query: 178 ALLDMYSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYG 357
ALLDMYSSCGD +A+ VFERIE PDLVSWN+++AG+S GDG AM FVQL+ +
Sbjct: 304 ALLDMYSSCGDLETALRVFERIETPDLVSWNTLIAGFSGVGDGCSAMDAFVQLKAVQFDE 363
Query: 358 ALVPDEYTFXXXXXXXXXLPAICYGKAFHGQVTKAGLEDSVFVGNTL 498
+VPDEYT LPA+ GK H +V KAGLE SVFVGNTL
Sbjct: 364 WVVPDEYTLAAVVSACATLPAMFGGKPLHAEVIKAGLESSVFVGNTL 410
Score = 78.6 bits (192), Expect = 5e-13
Identities = 44/127 (34%), Positives = 72/127 (56%)
Frame = +1
Query: 4 EQGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNAL 183
E L+ F SM+ +G +++ S L++ ++ L +G ++H V+KS ++ +L
Sbjct: 452 EMALKYFVSMLQEGYKVDSFSLSSALNSTAELAGLKQGEMLHAEVVKSGYEGNICASGSL 511
Query: 184 LDMYSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYGAL 363
+DMY+ G A VF I+KPDL WNS++ GY + G+ +MA ++F EM R G L
Sbjct: 512 VDMYAKNGALPGAYLVFSNIQKPDLKCWNSIIGGYGNHGNSEMAFKLF---GEMIRDG-L 567
Query: 364 VPDEYTF 384
PD T+
Sbjct: 568 QPDHVTY 574
Score = 76.6 bits (187), Expect = 2e-12
Identities = 44/163 (26%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Frame = +1
Query: 13 LRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNALLDM 192
++L + + ++P +T + V+SAC + + G+ +H VIK+ + + N LL+M
Sbjct: 354 VQLKAVQFDEWVVPDEYTLAAVVSACATLPAMFGGKPLHAEVIKAGLESSVFVGNTLLNM 413
Query: 193 YSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFV-QLQEMSRYGALVP 369
Y + + GSA +F + + D++ W ++AG+S G+G+MA++ FV LQE +
Sbjct: 414 YFTNEEPGSARILFHSLNQKDVIMWTEMVAGHSLLGEGEMALKYFVSMLQEGYKV----- 468
Query: 370 DEYTFXXXXXXXXXLPAICYGKAFHGQVTKAGLEDSVFVGNTL 498
D ++ L + G+ H +V K+G E ++ +L
Sbjct: 469 DSFSLSSALNSTAELAGLKQGEMLHAEVVKSGYEGNICASGSL 511
Score = 55.5 bits (132), Expect = 4e-06
Identities = 46/156 (29%), Positives = 60/156 (38%), Gaps = 5/156 (3%)
Frame = +1
Query: 7 QGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNALL 186
+G RLF + GL P+ + +L A G++ D G H + + ALL
Sbjct: 145 EGFRLFRRLHASGLRPTAPSLCALLRAAGELRDRRAGAAAHSQAVTLGFLASDIVPTALL 204
Query: 187 DMYSSCGDNGSAISVFERIEKPDLVSWNSVL-----AGYSDAGDGQMAMRVFVQLQEMSR 351
MYS CG A VF+ + D V+WN V+ GY D GQ V
Sbjct: 205 QMYSQCGAPRDANQVFDEMATRDGVAWNCVMHCNVRYGYLDRALGQFCRMV--------- 255
Query: 352 YGALVPDEYTFXXXXXXXXXLPAICYGKAFHGQVTK 459
G L P E T G+A HG V K
Sbjct: 256 RGGLPPTESTLSSVLSGCGRAGDCRRGRALHGWVVK 291
>gb|AEV41041.1| putative pentatricopeptide [Oryza minuta]
Length = 724
Score = 164 bits (414), Expect = 9e-39
Identities = 87/167 (52%), Positives = 110/167 (65%), Gaps = 1/167 (0%)
Frame = +1
Query: 1 VEQGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIK-SECPHDLRLHN 177
+++ L F M+ GL P+ T S VLS CG+ GD +GR++HG V+K E D+ L N
Sbjct: 208 LDRALGQFCRMVRGGLPPTESTLSSVLSGCGRAGDRRRGRVLHGWVVKLEELDPDMPLQN 267
Query: 178 ALLDMYSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYG 357
ALLDMYSSCGD +A+ VFERIE PDLVSWN+++AG+S G+G AM FVQL+ +
Sbjct: 268 ALLDMYSSCGDLETALCVFERIETPDLVSWNTLIAGFSGVGNGFSAMHAFVQLKAVQFDE 327
Query: 358 ALVPDEYTFXXXXXXXXXLPAICYGKAFHGQVTKAGLEDSVFVGNTL 498
+VPDEYT LPA+ GK H +V KAGLE SVFVGNTL
Sbjct: 328 RVVPDEYTLAAVVSACATLPAMFGGKPLHAEVIKAGLESSVFVGNTL 374
Score = 79.7 bits (195), Expect = 2e-13
Identities = 45/162 (27%), Positives = 86/162 (53%)
Frame = +1
Query: 13 LRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNALLDM 192
++L + + ++P +T + V+SAC + + G+ +H VIK+ + + N LL+M
Sbjct: 318 VQLKAVQFDERVVPDEYTLAAVVSACATLPAMFGGKPLHAEVIKAGLESSVFVGNTLLNM 377
Query: 193 YSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYGALVPD 372
Y + + GSA +F+ + + D++ W ++AG+S G+G++A+R FV M + G V D
Sbjct: 378 YFTNEEPGSARILFDSLTQKDVIMWTEMVAGHSSLGEGELALRYFV---SMLQEGYSV-D 433
Query: 373 EYTFXXXXXXXXXLPAICYGKAFHGQVTKAGLEDSVFVGNTL 498
++ L + G+ H QV K+G E ++ +L
Sbjct: 434 SFSLSSALNSTAELAGLKQGEMLHAQVVKSGYEGNICASGSL 475
Score = 77.0 bits (188), Expect = 1e-12
Identities = 45/127 (35%), Positives = 72/127 (56%)
Frame = +1
Query: 4 EQGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNAL 183
E LR F SM+ +G +++ S L++ ++ L +G ++H V+KS ++ +L
Sbjct: 416 ELALRYFVSMLQEGYSVDSFSLSSALNSTAELAGLKQGEMLHAQVVKSGYEGNICASGSL 475
Query: 184 LDMYSSCGDNGSAISVFERIEKPDLVSWNSVLAGYSDAGDGQMAMRVFVQLQEMSRYGAL 363
+DMY+ G A VF I+KPDL WNS++ GY + G+ +MA ++F EM R G L
Sbjct: 476 VDMYAKNGALPGAYLVFCNIQKPDLKCWNSLIGGYGNHGNSEMAFKLF---GEMIRDG-L 531
Query: 364 VPDEYTF 384
PD T+
Sbjct: 532 QPDHVTY 538
Score = 54.7 bits (130), Expect = 8e-06
Identities = 46/156 (29%), Positives = 59/156 (37%), Gaps = 5/156 (3%)
Frame = +1
Query: 7 QGLRLFSSMIGDGLLPSNWTFSIVLSACGKVGDLIKGRLVHGLVIKSECPHDLRLHNALL 186
+G RLF + GL P+ + +L A G++ D G H + ALL
Sbjct: 109 EGFRLFRRLHASGLRPTAPSLCALLRAAGELHDRRAGAAAHSQAATLGFLASDIVPTALL 168
Query: 187 DMYSSCGDNGSAISVFERIEKPDLVSWNSVL-----AGYSDAGDGQMAMRVFVQLQEMSR 351
MYS CG G A VF+ + D V+WN V+ GY D GQ V
Sbjct: 169 QMYSQCGAPGDANQVFDEMATRDGVAWNCVMHCNVRYGYLDRALGQFCRMV--------- 219
Query: 352 YGALVPDEYTFXXXXXXXXXLPAICYGKAFHGQVTK 459
G L P E T G+ HG V K
Sbjct: 220 RGGLPPTESTLSSVLSGCGRAGDRRRGRVLHGWVVK 255