BLASTX nr result

ID: Dioscorea21_contig00026880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026880
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557762.1| PREDICTED: uncharacterized protein LOC100842...    93   4e-17
tpg|DAA45693.1| TPA: hypothetical protein ZEAMMB73_083186 [Zea m...    89   4e-16
ref|NP_001146384.1| uncharacterized protein LOC100279962 [Zea ma...    89   4e-16
ref|XP_002869003.1| hypothetical protein ARALYDRAFT_490906 [Arab...    82   7e-14
ref|XP_002523584.1| Splicing factor, arginine/serine-rich, putat...    82   9e-14

>ref|XP_003557762.1| PREDICTED: uncharacterized protein LOC100842983 [Brachypodium
           distachyon]
          Length = 532

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 50/66 (75%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = +3

Query: 3   QEKN-KTPKPFVSTSSAMSKLSKAAPGGSLKTPQSEKKETPQERLKRIMSKQLNKQIRKD 179
           QE++ K  KP  STSSA+ KLSK APGG+ KTP +EKKETPQERLKRIMSKQLNKQIRKD
Sbjct: 395 QERSAKNLKPPTSTSSALLKLSKGAPGGAGKTPLTEKKETPQERLKRIMSKQLNKQIRKD 454

Query: 180 SAVETA 197
           +A ETA
Sbjct: 455 TAAETA 460


>tpg|DAA45693.1| TPA: hypothetical protein ZEAMMB73_083186 [Zea mays]
          Length = 534

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = +3

Query: 15  KTPKPFVSTSSAMSKLSKAAPGGSLKTPQSEKKETPQERLKRIMSKQLNKQIRKDSAVET 194
           K  KP  STSSA++KLSK A GG+ KTPQ+EKKETPQERLKRIMSKQLNKQI+KD+A E 
Sbjct: 400 KLLKPSPSTSSALAKLSKVASGGTGKTPQTEKKETPQERLKRIMSKQLNKQIKKDTAAEI 459

Query: 195 A 197
           A
Sbjct: 460 A 460


>ref|NP_001146384.1| uncharacterized protein LOC100279962 [Zea mays]
           gi|219886927|gb|ACL53838.1| unknown [Zea mays]
           gi|223948031|gb|ACN28099.1| unknown [Zea mays]
           gi|414867138|tpg|DAA45695.1| TPA: hypothetical protein
           ZEAMMB73_083186 [Zea mays] gi|414867139|tpg|DAA45696.1|
           TPA: hypothetical protein ZEAMMB73_083186 [Zea mays]
          Length = 322

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = +3

Query: 15  KTPKPFVSTSSAMSKLSKAAPGGSLKTPQSEKKETPQERLKRIMSKQLNKQIRKDSAVET 194
           K  KP  STSSA++KLSK A GG+ KTPQ+EKKETPQERLKRIMSKQLNKQI+KD+A E 
Sbjct: 188 KLLKPSPSTSSALAKLSKVASGGTGKTPQTEKKETPQERLKRIMSKQLNKQIKKDTAAEI 247

Query: 195 A 197
           A
Sbjct: 248 A 248


>ref|XP_002869003.1| hypothetical protein ARALYDRAFT_490906 [Arabidopsis lyrata subsp.
           lyrata] gi|297314839|gb|EFH45262.1| hypothetical protein
           ARALYDRAFT_490906 [Arabidopsis lyrata subsp. lyrata]
          Length = 505

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 44/61 (72%), Positives = 51/61 (83%)
 Frame = +3

Query: 15  KTPKPFVSTSSAMSKLSKAAPGGSLKTPQSEKKETPQERLKRIMSKQLNKQIRKDSAVET 194
           KT KP VSTS+A++KLSKA    S +T Q+EKKETPQERLKRIM+KQL KQI+KDSA ET
Sbjct: 398 KTAKPTVSTSTALAKLSKAGTSSSKQT-QAEKKETPQERLKRIMNKQLTKQIKKDSATET 456

Query: 195 A 197
           A
Sbjct: 457 A 457


>ref|XP_002523584.1| Splicing factor, arginine/serine-rich, putative [Ricinus communis]
           gi|223537146|gb|EEF38779.1| Splicing factor,
           arginine/serine-rich, putative [Ricinus communis]
          Length = 553

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 45/65 (69%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
 Frame = +3

Query: 6   EKNKTPKPFVSTSSAMSKLSKA-APGGSLKTPQSEKKETPQERLKRIMSKQLNKQIRKDS 182
           +  K  KP VSTSSA+SKL+KA A GG  K    EKKETPQERLKRIMSKQLNKQI+KD+
Sbjct: 401 KSTKVVKPAVSTSSALSKLTKASASGGPSKQQPGEKKETPQERLKRIMSKQLNKQIKKDT 460

Query: 183 AVETA 197
           A E A
Sbjct: 461 AAEMA 465


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