BLASTX nr result

ID: Dioscorea21_contig00026875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026875
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002441161.1| hypothetical protein SORBIDRAFT_09g021460 [S...   118   4e-26
ref|NP_001142776.1| uncharacterized protein LOC100275135 [Zea ma...   118   5e-26
dbj|BAJ89818.1| predicted protein [Hordeum vulgare subsp. vulgare]    113   1e-24
ref|XP_003568381.1| PREDICTED: uncharacterized protein LOC100838...   112   3e-24
ref|XP_002300985.1| predicted protein [Populus trichocarpa] gi|2...   103   5e-22

>ref|XP_002441161.1| hypothetical protein SORBIDRAFT_09g021460 [Sorghum bicolor]
           gi|241946446|gb|EES19591.1| hypothetical protein
           SORBIDRAFT_09g021460 [Sorghum bicolor]
          Length = 110

 Score =  118 bits (295), Expect(2) = 4e-26
 Identities = 56/100 (56%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
 Frame = -2

Query: 384 VGGLEQQAGRVIAERAGRCIRCGSAADLVESEKVLKLFFVPVWRWRSGGQGFYCRDCGLL 205
           VGG+EQ AGRV+ E AGRC+RCG AADLVE+EKVLKLFFVPVWRW      + CRDCGLL
Sbjct: 6   VGGVEQGAGRVLKEAAGRCLRCGGAADLVETEKVLKLFFVPVWRWPGKDPAYLCRDCGLL 65

Query: 204 WPQAALEDSGEKRR--MIEGVLKCGNCERVVEPEFQVLPF 91
            P +   + G  R   ++    +CG C R V+P+F+  PF
Sbjct: 66  APGSLGAEPGPGRSSLLLPREARCGACSRAVDPQFRFCPF 105



 Score = 25.0 bits (53), Expect(2) = 4e-26
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 104 KFCPFCGSDL 75
           +FCPFCGS L
Sbjct: 101 RFCPFCGSSL 110


>ref|NP_001142776.1| uncharacterized protein LOC100275135 [Zea mays]
           gi|195609474|gb|ACG26567.1| hypothetical protein [Zea
           mays] gi|195641802|gb|ACG40369.1| hypothetical protein
           [Zea mays] gi|413949185|gb|AFW81834.1| hypothetical
           protein ZEAMMB73_807317 [Zea mays]
          Length = 106

 Score =  118 bits (296), Expect(2) = 5e-26
 Identities = 56/98 (57%), Positives = 69/98 (70%)
 Frame = -2

Query: 384 VGGLEQQAGRVIAERAGRCIRCGSAADLVESEKVLKLFFVPVWRWRSGGQGFYCRDCGLL 205
           VGG+EQ AGRV+ E AGRC+RCG AADLVE+EKVLKLFFVPVWRW      + CR+CGLL
Sbjct: 6   VGGVEQGAGRVLKEAAGRCLRCGGAADLVETEKVLKLFFVPVWRWPGKDPAYLCRECGLL 65

Query: 204 WPQAALEDSGEKRRMIEGVLKCGNCERVVEPEFQVLPF 91
            P +   +SG    + E   +CG C R V+P+F+  PF
Sbjct: 66  APGSLGAESGPSLLLREA--RCGACSRAVDPQFRFCPF 101



 Score = 24.3 bits (51), Expect(2) = 5e-26
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 104 KFCPFCGSDL 75
           +FCPFCGS L
Sbjct: 97  RFCPFCGSAL 106


>dbj|BAJ89818.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 104

 Score =  113 bits (283), Expect(2) = 1e-24
 Identities = 53/98 (54%), Positives = 66/98 (67%)
 Frame = -2

Query: 384 VGGLEQQAGRVIAERAGRCIRCGSAADLVESEKVLKLFFVPVWRWRSGGQGFYCRDCGLL 205
           VGG+EQ AGRV+ E AGRC+RCG AADLVE+EKVLKLFFVP WRW      + CR CGLL
Sbjct: 6   VGGVEQGAGRVLKEAAGRCLRCGGAADLVETEKVLKLFFVPAWRWPGKDPAYLCRGCGLL 65

Query: 204 WPQAALEDSGEKRRMIEGVLKCGNCERVVEPEFQVLPF 91
            P++     G    ++    +CG C R V+P+F+  PF
Sbjct: 66  APRSL----GGGEPLLPRAAQCGACSRAVDPQFRFCPF 99



 Score = 24.6 bits (52), Expect(2) = 1e-24
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 104 KFCPFCGSDL 75
           +FCPFCGS L
Sbjct: 95  RFCPFCGSPL 104


>ref|XP_003568381.1| PREDICTED: uncharacterized protein LOC100838692 [Brachypodium
           distachyon]
          Length = 106

 Score =  112 bits (280), Expect(2) = 3e-24
 Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
 Frame = -2

Query: 384 VGGLEQQAGRVIAERAGRCIRCGSAADLVESEKVLKLFFVPVWRWRSGGQGFYCRDCGLL 205
           VGG+EQ AGRV+ E AGRC+RCG  ADLVE+EKVLKLFFVP WRW+     + CR+CGLL
Sbjct: 6   VGGVEQGAGRVLKEAAGRCLRCGGTADLVETEKVLKLFFVPAWRWQGKDPAYVCRECGLL 65

Query: 204 WPQA-ALEDSGEKRRMIEGVLKCGNCERVVEPEFQVLPF 91
            P++   E +G    ++    +CG C R V+P+F+  PF
Sbjct: 66  APESLGSEPAGP---LLPRGERCGACSRAVDPQFRFCPF 101



 Score = 24.3 bits (51), Expect(2) = 3e-24
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 104 KFCPFCGSDL 75
           +FCPFCGS L
Sbjct: 97  RFCPFCGSAL 106


>ref|XP_002300985.1| predicted protein [Populus trichocarpa] gi|222842711|gb|EEE80258.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  103 bits (256), Expect(2) = 5e-22
 Identities = 50/103 (48%), Positives = 65/103 (63%), Gaps = 5/103 (4%)
 Frame = -2

Query: 384 VGGLEQQAGRVIAERAGRCIRCGSAADLVESEKVLKLFFVPVWRWRSGGQGFYCRDCGLL 205
           VGG+EQQ  +V+   AGRCIRC S ADLVE EKVLKLFF+PVW+W       +C +C L+
Sbjct: 6   VGGVEQQVRQVLKSGAGRCIRCASKADLVEYEKVLKLFFIPVWKWPGKEPAMHCNNCNLI 65

Query: 204 WPQA-----ALEDSGEKRRMIEGVLKCGNCERVVEPEFQVLPF 91
           +PQ+        D    R ++   L+C  C+RVVE EF+  PF
Sbjct: 66  FPQSFSHTPPKSDYSLPRSVVTESLRCHFCDRVVESEFKFCPF 108



 Score = 26.2 bits (56), Expect(2) = 5e-22
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 104 KFCPFCGSDL 75
           KFCPFCGS L
Sbjct: 104 KFCPFCGSSL 113


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