BLASTX nr result

ID: Dioscorea21_contig00026869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026869
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001043913.1| Os01g0687500 [Oryza sativa Japonica Group] g...   116   2e-24
gb|EEC71298.1| hypothetical protein OsI_03318 [Oryza sativa Indi...   113   1e-23
ref|XP_002456167.1| hypothetical protein SORBIDRAFT_03g031530 [S...   112   2e-23
ref|NP_001149111.1| LOC100282733 [Zea mays] gi|194701390|gb|ACF8...   112   2e-23
ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-...   110   9e-23

>ref|NP_001043913.1| Os01g0687500 [Oryza sativa Japonica Group]
           gi|56784449|dbj|BAD82542.1| Met-tRNAi formyl
           transferase-like [Oryza sativa Japonica Group]
           gi|113533444|dbj|BAF05827.1| Os01g0687500 [Oryza sativa
           Japonica Group] gi|215697310|dbj|BAG91304.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222619073|gb|EEE55205.1| hypothetical protein
           OsJ_03057 [Oryza sativa Japonica Group]
          Length = 362

 Score =  116 bits (291), Expect = 2e-24
 Identities = 50/86 (58%), Positives = 71/86 (82%)
 Frame = +1

Query: 1   KILHNKVRAFAGWPGTRARIQVIDGNGNPNTLEIKIITTRVSGAYERQGEADEITFVGSA 180
           K+LHNKVRAFAGWPGTRA++Q+++ NG P+ LEIK+I+T+   + ++ G+ +E+ F G++
Sbjct: 261 KLLHNKVRAFAGWPGTRAKLQLVNQNGEPDVLEIKVISTKACASCDKTGDGNEVLFSGNS 320

Query: 181 MVIPCAGQSALEVLELQLPGKKVMTA 258
           ++IPC G S LEV+ELQLPGKKV TA
Sbjct: 321 LLIPCGGSSCLEVVELQLPGKKVTTA 346


>gb|EEC71298.1| hypothetical protein OsI_03318 [Oryza sativa Indica Group]
          Length = 362

 Score =  113 bits (283), Expect = 1e-23
 Identities = 49/86 (56%), Positives = 70/86 (81%)
 Frame = +1

Query: 1   KILHNKVRAFAGWPGTRARIQVIDGNGNPNTLEIKIITTRVSGAYERQGEADEITFVGSA 180
           K+LHNKVRAFAGWPGTRA++Q+++ NG  + LEIK+I+T+   + ++ G+ +E+ F G++
Sbjct: 261 KLLHNKVRAFAGWPGTRAKLQLVNQNGESDVLEIKVISTKACASCDKTGDGNEVLFSGNS 320

Query: 181 MVIPCAGQSALEVLELQLPGKKVMTA 258
           ++IPC G S LEV+ELQLPGKKV TA
Sbjct: 321 LLIPCGGSSCLEVVELQLPGKKVTTA 346


>ref|XP_002456167.1| hypothetical protein SORBIDRAFT_03g031530 [Sorghum bicolor]
           gi|241928142|gb|EES01287.1| hypothetical protein
           SORBIDRAFT_03g031530 [Sorghum bicolor]
          Length = 360

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/86 (60%), Positives = 71/86 (82%)
 Frame = +1

Query: 1   KILHNKVRAFAGWPGTRARIQVIDGNGNPNTLEIKIITTRVSGAYERQGEADEITFVGSA 180
           K+LHNKVRAFAGWPGTRA++Q+++ N  P+ LEIK+I+T+VS +  + G+ +EI F GS+
Sbjct: 259 KVLHNKVRAFAGWPGTRAKLQLVNQNSVPDVLEIKVISTKVSTSCVKAGDENEILFSGSS 318

Query: 181 MVIPCAGQSALEVLELQLPGKKVMTA 258
           ++IPC+G + LEVLELQLPGKKV  A
Sbjct: 319 LLIPCSGSTWLEVLELQLPGKKVTKA 344


>ref|NP_001149111.1| LOC100282733 [Zea mays] gi|194701390|gb|ACF84779.1| unknown [Zea
           mays] gi|195624820|gb|ACG34240.1| methionyl-tRNA
           formyltransferase [Zea mays]
           gi|414880939|tpg|DAA58070.1| TPA: methionyl-tRNA
           formyltransferase [Zea mays]
          Length = 360

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/86 (61%), Positives = 71/86 (82%)
 Frame = +1

Query: 1   KILHNKVRAFAGWPGTRARIQVIDGNGNPNTLEIKIITTRVSGAYERQGEADEITFVGSA 180
           K+LHNKVRAFAGWPGTRA++Q+I+ N  P+ LEIK+I+T+VS +  + G+ +EI F GS+
Sbjct: 259 KVLHNKVRAFAGWPGTRAKLQLINQNSVPDVLEIKVISTKVSTSCVKVGDENEILFSGSS 318

Query: 181 MVIPCAGQSALEVLELQLPGKKVMTA 258
           ++IPC+G + LEVLELQLPGKKV  A
Sbjct: 319 LLIPCSGSTWLEVLELQLPGKKVTKA 344


>ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-like [Vitis vinifera]
          Length = 365

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 2/87 (2%)
 Frame = +1

Query: 4   ILHNKVRAFAGWPGTRARIQVIDG-NGNPNTLEIKIITTRVSGAYERQ-GEADEITFVGS 177
           +LHNKVRAFAGWPGTRA++ VID  NG  N L++KIITTRV G    Q  EAD++ F+  
Sbjct: 263 VLHNKVRAFAGWPGTRAKVVVIDDKNGEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKD 322

Query: 178 AMVIPCAGQSALEVLELQLPGKKVMTA 258
           A+V PC+G SALEVLE+QLPGKKV+ A
Sbjct: 323 ALVFPCSGSSALEVLEVQLPGKKVVNA 349


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