BLASTX nr result
ID: Dioscorea21_contig00026854
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00026854 (240 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_567300.1| dehydrogenase/reductase SDR family member 4 [Ar... 73 3e-11 ref|XP_002874790.1| short-chain dehydrogenase/reductase family p... 72 4e-11 ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|1... 69 3e-10 gb|AFK42350.1| unknown [Lotus japonicus] 69 4e-10 ref|XP_001758659.1| predicted protein [Physcomitrella patens sub... 69 4e-10 >ref|NP_567300.1| dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana] gi|5732060|gb|AAD48959.1|AF147263_1 contains similarity to Pfam families PF00106 (short chain dehydrogenase; score=151.7, E=1.3e-41, N=1) and PF00678 (Short chain dehydrogenase/reductase C-terminus; score=48.9, E=1.1e-10, N=1) [Arabidopsis thaliana] gi|7267313|emb|CAB81095.1| AT4g05530 [Arabidopsis thaliana] gi|14334866|gb|AAK59611.1| unknown protein [Arabidopsis thaliana] gi|21281153|gb|AAM44948.1| unknown protein [Arabidopsis thaliana] gi|21593394|gb|AAM65343.1| putative tropinone reductase [Arabidopsis thaliana] gi|332657132|gb|AEE82532.1| dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana] Length = 254 Score = 72.8 bits (177), Expect = 3e-11 Identities = 36/44 (81%), Positives = 40/44 (90%) Frame = -2 Query: 137 ERTMARRLEGKVAIVTASTQGIGFSIAERFGLEGASVIVSSRKK 6 E+ + RRLEGKVAIVTASTQGIGF I ERFGLEGASV+VSSRK+ Sbjct: 2 EKKLPRRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQ 45 >ref|XP_002874790.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320627|gb|EFH51049.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] Length = 254 Score = 72.4 bits (176), Expect = 4e-11 Identities = 36/44 (81%), Positives = 40/44 (90%) Frame = -2 Query: 137 ERTMARRLEGKVAIVTASTQGIGFSIAERFGLEGASVIVSSRKK 6 E+ + RRLEGKVAIVTASTQGIGF I ERFGLEGASV+VSSRK+ Sbjct: 2 EKKLPRRLEGKVAIVTASTQGIGFGIIERFGLEGASVVVSSRKQ 45 >ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|118487888|gb|ABK95766.1| unknown [Populus trichocarpa] gi|222859658|gb|EEE97205.1| predicted protein [Populus trichocarpa] Length = 256 Score = 69.3 bits (168), Expect = 3e-10 Identities = 33/40 (82%), Positives = 38/40 (95%) Frame = -2 Query: 122 RRLEGKVAIVTASTQGIGFSIAERFGLEGASVIVSSRKKR 3 +R EGKV IVTASTQGIGFSIAERFGLEGASV++SSRK++ Sbjct: 9 KRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQK 48 >gb|AFK42350.1| unknown [Lotus japonicus] Length = 176 Score = 68.9 bits (167), Expect = 4e-10 Identities = 33/42 (78%), Positives = 39/42 (92%) Frame = -2 Query: 128 MARRLEGKVAIVTASTQGIGFSIAERFGLEGASVIVSSRKKR 3 + +R EGKVAIVTASTQGIGFSIAER GLEGASV++SSRK++ Sbjct: 6 LGKRFEGKVAIVTASTQGIGFSIAERLGLEGASVVISSRKQQ 47 >ref|XP_001758659.1| predicted protein [Physcomitrella patens subsp. patens] gi|162690269|gb|EDQ76637.1| predicted protein [Physcomitrella patens subsp. patens] Length = 253 Score = 68.9 bits (167), Expect = 4e-10 Identities = 32/40 (80%), Positives = 38/40 (95%) Frame = -2 Query: 122 RRLEGKVAIVTASTQGIGFSIAERFGLEGASVIVSSRKKR 3 RRLEGKVA++TASTQGIGF IAER GLEGASV++SSRK++ Sbjct: 6 RRLEGKVAVITASTQGIGFGIAERLGLEGASVVISSRKQK 45