BLASTX nr result

ID: Dioscorea21_contig00026854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026854
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567300.1| dehydrogenase/reductase SDR family member 4 [Ar...    73   3e-11
ref|XP_002874790.1| short-chain dehydrogenase/reductase family p...    72   4e-11
ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|1...    69   3e-10
gb|AFK42350.1| unknown [Lotus japonicus]                               69   4e-10
ref|XP_001758659.1| predicted protein [Physcomitrella patens sub...    69   4e-10

>ref|NP_567300.1| dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana]
           gi|5732060|gb|AAD48959.1|AF147263_1 contains similarity
           to Pfam families PF00106 (short chain dehydrogenase;
           score=151.7, E=1.3e-41, N=1) and PF00678 (Short chain
           dehydrogenase/reductase C-terminus; score=48.9,
           E=1.1e-10, N=1) [Arabidopsis thaliana]
           gi|7267313|emb|CAB81095.1| AT4g05530 [Arabidopsis
           thaliana] gi|14334866|gb|AAK59611.1| unknown protein
           [Arabidopsis thaliana] gi|21281153|gb|AAM44948.1|
           unknown protein [Arabidopsis thaliana]
           gi|21593394|gb|AAM65343.1| putative tropinone reductase
           [Arabidopsis thaliana] gi|332657132|gb|AEE82532.1|
           dehydrogenase/reductase SDR family member 4 [Arabidopsis
           thaliana]
          Length = 254

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = -2

Query: 137 ERTMARRLEGKVAIVTASTQGIGFSIAERFGLEGASVIVSSRKK 6
           E+ + RRLEGKVAIVTASTQGIGF I ERFGLEGASV+VSSRK+
Sbjct: 2   EKKLPRRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQ 45


>ref|XP_002874790.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297320627|gb|EFH51049.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 254

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = -2

Query: 137 ERTMARRLEGKVAIVTASTQGIGFSIAERFGLEGASVIVSSRKK 6
           E+ + RRLEGKVAIVTASTQGIGF I ERFGLEGASV+VSSRK+
Sbjct: 2   EKKLPRRLEGKVAIVTASTQGIGFGIIERFGLEGASVVVSSRKQ 45


>ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|118487888|gb|ABK95766.1|
           unknown [Populus trichocarpa]
           gi|222859658|gb|EEE97205.1| predicted protein [Populus
           trichocarpa]
          Length = 256

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = -2

Query: 122 RRLEGKVAIVTASTQGIGFSIAERFGLEGASVIVSSRKKR 3
           +R EGKV IVTASTQGIGFSIAERFGLEGASV++SSRK++
Sbjct: 9   KRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQK 48


>gb|AFK42350.1| unknown [Lotus japonicus]
          Length = 176

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/42 (78%), Positives = 39/42 (92%)
 Frame = -2

Query: 128 MARRLEGKVAIVTASTQGIGFSIAERFGLEGASVIVSSRKKR 3
           + +R EGKVAIVTASTQGIGFSIAER GLEGASV++SSRK++
Sbjct: 6   LGKRFEGKVAIVTASTQGIGFSIAERLGLEGASVVISSRKQQ 47


>ref|XP_001758659.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162690269|gb|EDQ76637.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 253

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = -2

Query: 122 RRLEGKVAIVTASTQGIGFSIAERFGLEGASVIVSSRKKR 3
           RRLEGKVA++TASTQGIGF IAER GLEGASV++SSRK++
Sbjct: 6   RRLEGKVAVITASTQGIGFGIAERLGLEGASVVISSRKQK 45


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