BLASTX nr result

ID: Dioscorea21_contig00026818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026818
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW70189.1| hypothetical protein ZEAMMB73_026847 [Zea mays]        417   e-114
gb|ACN34087.1| unknown [Zea mays] gi|413935636|gb|AFW70187.1| hy...   417   e-114
ref|NP_001045923.1| Os02g0153000 [Oryza sativa Japonica Group] g...   414   e-113
ref|XP_002451560.1| hypothetical protein SORBIDRAFT_04g003780 [S...   412   e-113
ref|XP_003574827.1| PREDICTED: uncharacterized protein LOC100845...   404   e-110

>gb|AFW70189.1| hypothetical protein ZEAMMB73_026847 [Zea mays]
          Length = 597

 Score =  417 bits (1072), Expect = e-114
 Identities = 199/292 (68%), Positives = 244/292 (83%)
 Frame = -3

Query: 1213 SPGFKMNEIREPLTPQKTFDPYQVSGKMSWKNAGSYSLAAEVSWMCVGKTQLEYAAEALK 1034
            SP    N   E +   + FDPY+V+GK + ++ G+Y  AAEVSWM VGK QLEYA+EALK
Sbjct: 285  SPSVDSNHNDETMKEVRNFDPYKVNGKETRRDIGNYRSAAEVSWMSVGKDQLEYASEALK 344

Query: 1033 GFRFLVEQLAKVNPSCMSANERLAFWINLYNTLIMHAYLAYGVPKSDMKLFSLMQKVSYT 854
             FRFLVEQL+KVNPSCM  ++RLAFWINLYN LIMHAYLAYGVP++D+KLFSLMQK  YT
Sbjct: 345  KFRFLVEQLSKVNPSCMDRDQRLAFWINLYNALIMHAYLAYGVPRNDIKLFSLMQKACYT 404

Query: 853  VGGCSFSAAEIEFVILKMKPPAYRPQIALILALHKFKISEEHKRYSIDSSEPLVVFALSC 674
            VGG SFSAAEIEFVILKMK P +RPQ++L+L L+KFKI+E+HK+YSID  EPL++F LSC
Sbjct: 405  VGGQSFSAAEIEFVILKMKTPVHRPQLSLMLTLNKFKITEDHKKYSIDEFEPLLLFGLSC 464

Query: 673  GMYSSPAVRVFTAENVREELQNSMRDYMRAYIGINNKGKLLVPKLVYCFAKDIVEDSLLV 494
            GM+SSPAVR+F+A NVR+ELQ S+RDY++A +G N KGKLL+PKLV  +AK  VEDSLL 
Sbjct: 465  GMFSSPAVRIFSAANVRQELQESLRDYIQATVGTNGKGKLLIPKLVQSYAKGAVEDSLLA 524

Query: 493  DWICRYLSPDQVTVVRDSASQWKQRLLGVRSFSIIPFDTRFRYLFLPDGKGT 338
            DWIC +L+PDQ TV+RDS+SQWKQRLLG RSF+++ FD++FRYLFLPD  G+
Sbjct: 525  DWICHHLAPDQATVIRDSSSQWKQRLLGARSFTVLAFDSKFRYLFLPDSCGS 576


>gb|ACN34087.1| unknown [Zea mays] gi|413935636|gb|AFW70187.1| hypothetical protein
            ZEAMMB73_026847 [Zea mays]
          Length = 687

 Score =  417 bits (1072), Expect = e-114
 Identities = 199/292 (68%), Positives = 244/292 (83%)
 Frame = -3

Query: 1213 SPGFKMNEIREPLTPQKTFDPYQVSGKMSWKNAGSYSLAAEVSWMCVGKTQLEYAAEALK 1034
            SP    N   E +   + FDPY+V+GK + ++ G+Y  AAEVSWM VGK QLEYA+EALK
Sbjct: 375  SPSVDSNHNDETMKEVRNFDPYKVNGKETRRDIGNYRSAAEVSWMSVGKDQLEYASEALK 434

Query: 1033 GFRFLVEQLAKVNPSCMSANERLAFWINLYNTLIMHAYLAYGVPKSDMKLFSLMQKVSYT 854
             FRFLVEQL+KVNPSCM  ++RLAFWINLYN LIMHAYLAYGVP++D+KLFSLMQK  YT
Sbjct: 435  KFRFLVEQLSKVNPSCMDRDQRLAFWINLYNALIMHAYLAYGVPRNDIKLFSLMQKACYT 494

Query: 853  VGGCSFSAAEIEFVILKMKPPAYRPQIALILALHKFKISEEHKRYSIDSSEPLVVFALSC 674
            VGG SFSAAEIEFVILKMK P +RPQ++L+L L+KFKI+E+HK+YSID  EPL++F LSC
Sbjct: 495  VGGQSFSAAEIEFVILKMKTPVHRPQLSLMLTLNKFKITEDHKKYSIDEFEPLLLFGLSC 554

Query: 673  GMYSSPAVRVFTAENVREELQNSMRDYMRAYIGINNKGKLLVPKLVYCFAKDIVEDSLLV 494
            GM+SSPAVR+F+A NVR+ELQ S+RDY++A +G N KGKLL+PKLV  +AK  VEDSLL 
Sbjct: 555  GMFSSPAVRIFSAANVRQELQESLRDYIQATVGTNGKGKLLIPKLVQSYAKGAVEDSLLA 614

Query: 493  DWICRYLSPDQVTVVRDSASQWKQRLLGVRSFSIIPFDTRFRYLFLPDGKGT 338
            DWIC +L+PDQ TV+RDS+SQWKQRLLG RSF+++ FD++FRYLFLPD  G+
Sbjct: 615  DWICHHLAPDQATVIRDSSSQWKQRLLGARSFTVLAFDSKFRYLFLPDSCGS 666


>ref|NP_001045923.1| Os02g0153000 [Oryza sativa Japonica Group]
            gi|51535341|dbj|BAD38600.1| ternary complex factor
            MIP1-like [Oryza sativa Japonica Group]
            gi|74272488|gb|ABA01090.1| ternary complex factor
            MIP1-like [Oryza rufipogon] gi|76364057|gb|ABA41566.1|
            ternary complex factor MIP1-like [Oryza sativa Indica
            Group] gi|113535454|dbj|BAF07837.1| Os02g0153000 [Oryza
            sativa Japonica Group]
          Length = 454

 Score =  414 bits (1063), Expect = e-113
 Identities = 200/292 (68%), Positives = 246/292 (84%)
 Frame = -3

Query: 1213 SPGFKMNEIREPLTPQKTFDPYQVSGKMSWKNAGSYSLAAEVSWMCVGKTQLEYAAEALK 1034
            SP    N   E  T    FDPY+V+GK S ++ G+Y  AAEVSWM VGK QLEYA+EALK
Sbjct: 154  SPSVDSNRNDEMTTEASNFDPYKVNGKESRRDIGNYHSAAEVSWMSVGKEQLEYASEALK 213

Query: 1033 GFRFLVEQLAKVNPSCMSANERLAFWINLYNTLIMHAYLAYGVPKSDMKLFSLMQKVSYT 854
             FRFLVEQL+KVNP+ M+ +ERLAFWINLYN LIMHAYLAYGVP++D+KLFSLMQK  YT
Sbjct: 214  KFRFLVEQLSKVNPNSMNCDERLAFWINLYNALIMHAYLAYGVPRNDIKLFSLMQKACYT 273

Query: 853  VGGCSFSAAEIEFVILKMKPPAYRPQIALILALHKFKISEEHKRYSIDSSEPLVVFALSC 674
            VGG SFSAAEIEFVILKMK P +RPQ++L+LAL+KFKI+EEHK+YSID +EPLV+F LSC
Sbjct: 274  VGGQSFSAAEIEFVILKMKTPVHRPQLSLMLALNKFKITEEHKKYSIDGTEPLVLFGLSC 333

Query: 673  GMYSSPAVRVFTAENVREELQNSMRDYMRAYIGINNKGKLLVPKLVYCFAKDIVEDSLLV 494
            GM+SSPAVR+F+A NVR+ELQ S+RDY++A +GI+++GKLL+PKL+  +AK  VEDSLL 
Sbjct: 334  GMFSSPAVRIFSAANVRQELQESLRDYVQASVGISDRGKLLIPKLLQSYAKGNVEDSLLA 393

Query: 493  DWICRYLSPDQVTVVRDSASQWKQRLLGVRSFSIIPFDTRFRYLFLPDGKGT 338
            DWIC +L+PDQV V+RDS+SQ KQRLLG RSF+++ FD++FRYLFLPD  G+
Sbjct: 394  DWICHHLTPDQVAVIRDSSSQRKQRLLGARSFTVVAFDSKFRYLFLPDSSGS 445


>ref|XP_002451560.1| hypothetical protein SORBIDRAFT_04g003780 [Sorghum bicolor]
            gi|241931391|gb|EES04536.1| hypothetical protein
            SORBIDRAFT_04g003780 [Sorghum bicolor]
          Length = 462

 Score =  412 bits (1060), Expect = e-113
 Identities = 197/292 (67%), Positives = 244/292 (83%)
 Frame = -3

Query: 1213 SPGFKMNEIREPLTPQKTFDPYQVSGKMSWKNAGSYSLAAEVSWMCVGKTQLEYAAEALK 1034
            SP    N   E +   + FDPY+V+GK + ++ G+Y  AAEVSWM VGK QLEYA+EALK
Sbjct: 154  SPSVDSNHNNETMNEVRNFDPYKVNGKETRRDIGNYRSAAEVSWMSVGKDQLEYASEALK 213

Query: 1033 GFRFLVEQLAKVNPSCMSANERLAFWINLYNTLIMHAYLAYGVPKSDMKLFSLMQKVSYT 854
             FRFLVEQL+KVNPSCM+ ++RLAFWINLYN LIMHAYLAYGVP++D+KLFSLMQK  YT
Sbjct: 214  KFRFLVEQLSKVNPSCMNRDQRLAFWINLYNALIMHAYLAYGVPRNDIKLFSLMQKACYT 273

Query: 853  VGGCSFSAAEIEFVILKMKPPAYRPQIALILALHKFKISEEHKRYSIDSSEPLVVFALSC 674
            VGG SFSAAEIEFVILKMK P +RPQ++L+LAL+KFKI+E+HK+YSID  EPL++F LSC
Sbjct: 274  VGGQSFSAAEIEFVILKMKTPVHRPQLSLMLALNKFKITEDHKKYSIDEFEPLLLFGLSC 333

Query: 673  GMYSSPAVRVFTAENVREELQNSMRDYMRAYIGINNKGKLLVPKLVYCFAKDIVEDSLLV 494
            GM+SSPAVR+F+A NVR+ELQ S+RDY++A +G N+KGKLL+PKLV  +AK  VEDSLL 
Sbjct: 334  GMFSSPAVRIFSAANVRQELQESLRDYIQATVGTNDKGKLLIPKLVQSYAKGAVEDSLLA 393

Query: 493  DWICRYLSPDQVTVVRDSASQWKQRLLGVRSFSIIPFDTRFRYLFLPDGKGT 338
            DWIC +L+PDQ  V+RDS+SQ KQRLLG R F+++ FD++FRYLFLPD  G+
Sbjct: 394  DWICHHLAPDQAAVIRDSSSQRKQRLLGFRGFTVLAFDSKFRYLFLPDSSGS 445


>ref|XP_003574827.1| PREDICTED: uncharacterized protein LOC100845414 [Brachypodium
            distachyon]
          Length = 665

 Score =  404 bits (1039), Expect = e-110
 Identities = 194/282 (68%), Positives = 240/282 (85%)
 Frame = -3

Query: 1195 NEIREPLTPQKTFDPYQVSGKMSWKNAGSYSLAAEVSWMCVGKTQLEYAAEALKGFRFLV 1016
            N   E +   + FDPY+V+GK + ++ G+Y  AAEVSWM VGK QLEYA+EALK FRFLV
Sbjct: 371  NHHDEMMNQARIFDPYKVNGKETRRDIGNYCSAAEVSWMSVGKEQLEYASEALKKFRFLV 430

Query: 1015 EQLAKVNPSCMSANERLAFWINLYNTLIMHAYLAYGVPKSDMKLFSLMQKVSYTVGGCSF 836
            EQL+KVNP+CM+++ERLAFWINLYN LIMH+YLAYGVP++D+KLFSLMQK  YTVGG S 
Sbjct: 431  EQLSKVNPNCMNSDERLAFWINLYNALIMHSYLAYGVPRNDIKLFSLMQKACYTVGGQSV 490

Query: 835  SAAEIEFVILKMKPPAYRPQIALILALHKFKISEEHKRYSIDSSEPLVVFALSCGMYSSP 656
            SAAEIEFVILKMK P +RPQ++L+LALHKFKISEEHK+YSI+ +EPL++F LSCGM+SSP
Sbjct: 491  SAAEIEFVILKMKTPVHRPQLSLMLALHKFKISEEHKKYSINEAEPLLLFGLSCGMFSSP 550

Query: 655  AVRVFTAENVREELQNSMRDYMRAYIGINNKGKLLVPKLVYCFAKDIVEDSLLVDWICRY 476
            AVR++TA NVR EL  SMRDY++A +GI+++GKLL+PKLV  +AK  VEDSL  DWIC +
Sbjct: 551  AVRIYTASNVRHELLESMRDYIQASVGISDRGKLLIPKLVQSYAKGAVEDSLFTDWICHH 610

Query: 475  LSPDQVTVVRDSASQWKQRLLGVRSFSIIPFDTRFRYLFLPD 350
            LSPDQV  +RDS+SQ +QRLLG RSF++I FD++FRYLFLPD
Sbjct: 611  LSPDQVAAMRDSSSQRRQRLLGARSFTVITFDSKFRYLFLPD 652


Top