BLASTX nr result

ID: Dioscorea21_contig00026740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026740
         (1066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003561869.1| PREDICTED: probable E3 ubiquitin-protein lig...   446   e-123
ref|XP_002465615.1| hypothetical protein SORBIDRAFT_01g042240 [S...   441   e-121
gb|AFW89121.1| putative RING zinc finger domain superfamily prot...   439   e-121
tpg|DAA44180.1| TPA: putative RING zinc finger domain superfamil...   438   e-120
gb|EAY89156.1| hypothetical protein OsI_10649 [Oryza sativa Indi...   437   e-120

>ref|XP_003561869.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI2-like
            [Brachypodium distachyon]
          Length = 619

 Score =  446 bits (1146), Expect = e-123
 Identities = 209/353 (59%), Positives = 256/353 (72%)
 Frame = -2

Query: 1065 AICDEAIVRKLVAKKCPDVVCRFDRFLLESYVEDNNKVKWCPSTPHCGNAIXXXXXXXXX 886
            AICDEA+VRKLV+ KCPD+  RF+RFLLESY+EDN+ VKWCPSTPHCGNAI         
Sbjct: 189  AICDEALVRKLVSAKCPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRVKGDIHCE 248

Query: 885  XXXXCGLTFCFNCLSEAHSPCSCKMWELWSQKCKNESENINWIMVNTKPCPKCRKNVIKN 706
                CG  FCFNC SEAHSPCSC MWELW +KC++ESE +NWI VNTKPCPKC K V KN
Sbjct: 249  VECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWITVNTKPCPKCHKPVEKN 308

Query: 705  GGCNHVRCICGQCFCWLCGNATGEGHSFDTIDGHSCGRYDDAKLRHIERAKRDLYRYTHY 526
            GGCN V CICGQ FCWLCG ATG  H++ +I GHSCGR+ + +    E+A+RDLYRY HY
Sbjct: 309  GGCNLVACICGQAFCWLCGGATGRDHTWSSISGHSCGRFTEDQSTKTEQARRDLYRYMHY 368

Query: 525  HDRYESHAKSLKEEINLYETIEELINDSKSEDTHFKSFRWALDGLNQLKRAREVLSYSYP 346
            H+RY++H  SLK+E  L   I+  I+ S+++D+  K + W ++GLN+L R+R VLSYSYP
Sbjct: 369  HNRYKAHTDSLKQEAKLKRDIQWKISISENKDSKIKDYSWVINGLNRLFRSRRVLSYSYP 428

Query: 345  FAFYMFGRELFIDMFGRQLFIDDMRPEKSLMKKNLFEDQQQQLECQVENLSMHLGKTFHL 166
            FAFYMF  E         +F D+M P++  +K+NLFEDQQQQLE  VE LS  L K F  
Sbjct: 429  FAFYMFSDE---------IFKDEMTPQERELKQNLFEDQQQQLEFNVERLSGFLEKDFQN 479

Query: 165  LSDRELFETSQHVTNLSCIVNRLCKEMYKCIENDLLLPFRKNHPIAPYMSNVL 7
             +D E+ +T +HV NLS +V+RLCK+MY+CIENDLL P R  H IAPY S  L
Sbjct: 480  FADDEVMDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKSKGL 532


>ref|XP_002465615.1| hypothetical protein SORBIDRAFT_01g042240 [Sorghum bicolor]
            gi|241919469|gb|EER92613.1| hypothetical protein
            SORBIDRAFT_01g042240 [Sorghum bicolor]
          Length = 604

 Score =  441 bits (1135), Expect = e-121
 Identities = 206/353 (58%), Positives = 255/353 (72%)
 Frame = -2

Query: 1065 AICDEAIVRKLVAKKCPDVVCRFDRFLLESYVEDNNKVKWCPSTPHCGNAIXXXXXXXXX 886
            AICDEAI+RKLV  + PD+  RF+RFLLESY+EDN+ VKWCPSTPHCGNAI         
Sbjct: 188  AICDEAIIRKLVIARHPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRVKGDIYCE 247

Query: 885  XXXXCGLTFCFNCLSEAHSPCSCKMWELWSQKCKNESENINWIMVNTKPCPKCRKNVIKN 706
                CG  FCFNC  +AHSPCSC MWELW +KC++ESE +NWI VNTKPCPKC K V KN
Sbjct: 248  VECTCGCQFCFNCSLQAHSPCSCMMWELWIKKCRDESETVNWITVNTKPCPKCHKPVEKN 307

Query: 705  GGCNHVRCICGQCFCWLCGNATGEGHSFDTIDGHSCGRYDDAKLRHIERAKRDLYRYTHY 526
            GGCN V CICGQ FCWLCG ATG  H++ +I GHSCGR+ D + +  E+A+RDLYRY HY
Sbjct: 308  GGCNLVACICGQAFCWLCGGATGRDHTWSSISGHSCGRFTDDQTKKTEQARRDLYRYMHY 367

Query: 525  HDRYESHAKSLKEEINLYETIEELINDSKSEDTHFKSFRWALDGLNQLKRAREVLSYSYP 346
            H+RY++H  SLK+E  L   I+  I+ S+++++  K + W ++GLN+L R+R VLSYSYP
Sbjct: 368  HNRYKAHTDSLKQEAKLKNEIQGKISISENKESKIKDYSWVMNGLNRLFRSRRVLSYSYP 427

Query: 345  FAFYMFGRELFIDMFGRQLFIDDMRPEKSLMKKNLFEDQQQQLECQVENLSMHLGKTFHL 166
            FAFYMFG E         +F D+M P +  +K+NLFEDQQQQLE  VE LS  L K F L
Sbjct: 428  FAFYMFGDE---------IFKDEMTPHEREVKQNLFEDQQQQLEFNVERLSGFLEKDFQL 478

Query: 165  LSDRELFETSQHVTNLSCIVNRLCKEMYKCIENDLLLPFRKNHPIAPYMSNVL 7
             +D E+ +T +HV NLS +V++LCK+MY+CIENDLL P R  H IAPY S  L
Sbjct: 479  FTDDEVMDTMKHVINLSNVVDKLCKQMYQCIENDLLYPLRTPHNIAPYKSKGL 531


>gb|AFW89121.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 618

 Score =  439 bits (1129), Expect = e-121
 Identities = 205/353 (58%), Positives = 254/353 (71%)
 Frame = -2

Query: 1065 AICDEAIVRKLVAKKCPDVVCRFDRFLLESYVEDNNKVKWCPSTPHCGNAIXXXXXXXXX 886
            AICDEAI+RKLV  + PD+  RF+RFLLESY+EDN+ VKWCPSTPHCGNAI         
Sbjct: 187  AICDEAIIRKLVIARHPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRVKGDIYCE 246

Query: 885  XXXXCGLTFCFNCLSEAHSPCSCKMWELWSQKCKNESENINWIMVNTKPCPKCRKNVIKN 706
                CG  FCFNC  + HSPCSC MWELW +KC +ESE +NWI VNTKPCPKC K V KN
Sbjct: 247  VECTCGCQFCFNCSLQTHSPCSCMMWELWIKKCHDESETVNWITVNTKPCPKCHKPVEKN 306

Query: 705  GGCNHVRCICGQCFCWLCGNATGEGHSFDTIDGHSCGRYDDAKLRHIERAKRDLYRYTHY 526
            GGCN V CICGQ FCWLCG ATG  H++ +I GHSCGR+ + + +  E+A+RDLYRY HY
Sbjct: 307  GGCNLVACICGQAFCWLCGGATGRDHTWSSISGHSCGRFTNDQTKKTEQARRDLYRYMHY 366

Query: 525  HDRYESHAKSLKEEINLYETIEELINDSKSEDTHFKSFRWALDGLNQLKRAREVLSYSYP 346
            H+RY++H  SLK+E  L   I+  I+ S+++++  K + W ++GLN+L R+R VLSYSYP
Sbjct: 367  HNRYKAHTDSLKQEAKLKNEIQGKISISENKESKIKDYSWVINGLNRLFRSRRVLSYSYP 426

Query: 345  FAFYMFGRELFIDMFGRQLFIDDMRPEKSLMKKNLFEDQQQQLECQVENLSMHLGKTFHL 166
            FAFYMFG E         +F D+M P++  +K+NLFEDQQQQLE  VE LS  L K F L
Sbjct: 427  FAFYMFGDE---------IFKDEMTPQERELKQNLFEDQQQQLEFNVERLSGFLEKDFQL 477

Query: 165  LSDRELFETSQHVTNLSCIVNRLCKEMYKCIENDLLLPFRKNHPIAPYMSNVL 7
             +D E+ +T +HV NLS +V+RLCK+MY+CIENDLL P R  H IAPY S  L
Sbjct: 478  FTDDEVMDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKSKGL 530


>tpg|DAA44180.1| TPA: putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 607

 Score =  438 bits (1126), Expect = e-120
 Identities = 205/350 (58%), Positives = 252/350 (72%)
 Frame = -2

Query: 1065 AICDEAIVRKLVAKKCPDVVCRFDRFLLESYVEDNNKVKWCPSTPHCGNAIXXXXXXXXX 886
            A+CDEAI+RKLV  +   +  RF+RFLLESY+EDN+ VKWCPSTPHCGNAI         
Sbjct: 187  AVCDEAIIRKLVTARHLYIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRVKGDIYCE 246

Query: 885  XXXXCGLTFCFNCLSEAHSPCSCKMWELWSQKCKNESENINWIMVNTKPCPKCRKNVIKN 706
                CG  FCFNC   AHSPCSC MWELW +KC++ESE +NWI VNTKPCPKC K V KN
Sbjct: 247  VECTCGCQFCFNCSLRAHSPCSCMMWELWIKKCRDESETVNWITVNTKPCPKCHKPVEKN 306

Query: 705  GGCNHVRCICGQCFCWLCGNATGEGHSFDTIDGHSCGRYDDAKLRHIERAKRDLYRYTHY 526
            GGCN V CICGQ FCWLCG ATG  H++ TI GHSCGR+ D + +  E+A+RDLYRY HY
Sbjct: 307  GGCNLVACICGQAFCWLCGGATGRDHTWSTISGHSCGRFTDDQTKKTEQARRDLYRYMHY 366

Query: 525  HDRYESHAKSLKEEINLYETIEELINDSKSEDTHFKSFRWALDGLNQLKRAREVLSYSYP 346
            H+RY++H  SLK+E  L   I+  I+ S+++++  K + W ++GLN+L R+R VLSYSYP
Sbjct: 367  HNRYKAHTDSLKQEAKLKNEIQGKISISENKESKIKDYSWVINGLNRLFRSRRVLSYSYP 426

Query: 345  FAFYMFGRELFIDMFGRQLFIDDMRPEKSLMKKNLFEDQQQQLECQVENLSMHLGKTFHL 166
            FAFYMFG E         +F D+M PE+  +K+NLFEDQQQQLE  VE LS  L K F L
Sbjct: 427  FAFYMFGDE---------IFKDEMTPEERELKQNLFEDQQQQLEFNVERLSGFLEKDFQL 477

Query: 165  LSDRELFETSQHVTNLSCIVNRLCKEMYKCIENDLLLPFRKNHPIAPYMS 16
             +D E+ +T +HV NLS +V+RLCK+MY+CIENDLL P R  H IAPY S
Sbjct: 478  FTDDEVMDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKS 527


>gb|EAY89156.1| hypothetical protein OsI_10649 [Oryza sativa Indica Group]
          Length = 582

 Score =  437 bits (1124), Expect = e-120
 Identities = 207/352 (58%), Positives = 254/352 (72%)
 Frame = -2

Query: 1062 ICDEAIVRKLVAKKCPDVVCRFDRFLLESYVEDNNKVKWCPSTPHCGNAIXXXXXXXXXX 883
            ICDEAIVRKLV  K PD+  RF+RFLLESY+EDN+ VKWCPSTPHCGNAI          
Sbjct: 178  ICDEAIVRKLVNAKRPDIAERFERFLLESYIEDNDTVKWCPSTPHCGNAIRVKGDIHCEV 237

Query: 882  XXXCGLTFCFNCLSEAHSPCSCKMWELWSQKCKNESENINWIMVNTKPCPKCRKNVIKNG 703
               CG  FCFNC SEAHSPCSC MWELW +KC++ESE +NWI VNTKPCPKC K V KNG
Sbjct: 238  ECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVNWITVNTKPCPKCHKPVEKNG 297

Query: 702  GCNHVRCICGQCFCWLCGNATGEGHSFDTIDGHSCGRYDDAKLRHIERAKRDLYRYTHYH 523
            GCN V CICGQ FCWLCG ATG  H++ +I GHSCGR+ + + +  E+A+R+LYRY HYH
Sbjct: 298  GCNLVACICGQAFCWLCGGATGRDHTWSSISGHSCGRFTEDQSKKTEQARRNLYRYMHYH 357

Query: 522  DRYESHAKSLKEEINLYETIEELINDSKSEDTHFKSFRWALDGLNQLKRAREVLSYSYPF 343
            +RY++H  SLK+E  L   I+  I+ S+++D+  K + W ++GLN+L R+R VLSYSYPF
Sbjct: 358  NRYKAHTDSLKQEAKLKGDIQGKISISENKDSKIKDYSWVINGLNRLFRSRRVLSYSYPF 417

Query: 342  AFYMFGRELFIDMFGRQLFIDDMRPEKSLMKKNLFEDQQQQLECQVENLSMHLGKTFHLL 163
            AFYMFG E         +F D+M  ++  +K+NLFEDQQQQLE  VE LS  L + F   
Sbjct: 418  AFYMFGDE---------IFKDEMTSDERELKQNLFEDQQQQLEFNVERLSGFLERDFQNF 468

Query: 162  SDRELFETSQHVTNLSCIVNRLCKEMYKCIENDLLLPFRKNHPIAPYMSNVL 7
            SD E+ +T +HV NLS +V+RLCK+MY+CIENDLL P R  H IAPY S  L
Sbjct: 469  SDDEVMDTMKHVINLSNVVDRLCKQMYQCIENDLLYPLRTPHNIAPYKSKGL 520


Top