BLASTX nr result

ID: Dioscorea21_contig00026731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026731
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFA27461.1| photosystem II protein D2 [Molineria capitulata]       496   e-138
gb|ADD30582.1| photosystem II protein D2 [Euonymus americanus] g...   496   e-138
gb|ADD30580.1| photosystem II protein D2 [Bulnesia arborea] gi|3...   496   e-138
gb|AAQ09474.1| photosystem II D2 protein, partial (chloroplast) ...   496   e-138
gb|AFA27489.1| photosystem II protein D2 [Syngonanthus chrysanthus]   496   e-138

>gb|AFA27461.1| photosystem II protein D2 [Molineria capitulata]
          Length = 353

 Score =  496 bits (1278), Expect = e-138
 Identities = 240/251 (95%), Positives = 240/251 (95%)
 Frame = +3

Query: 3   SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS 182
           SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS
Sbjct: 89  SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS 148

Query: 183 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMXXXXXXXX 362
           APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMM        
Sbjct: 149 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGA 208

Query: 363 XXXCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL 542
              CAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL
Sbjct: 209 ALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL 268

Query: 543 HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA 722
           HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA
Sbjct: 269 HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA 328

Query: 723 WMAAQDQPHEN 755
           WMAAQDQPHEN
Sbjct: 329 WMAAQDQPHEN 339


>gb|ADD30582.1| photosystem II protein D2 [Euonymus americanus]
           gi|408899216|gb|AFU94442.1| PsbD, partial (chloroplast)
           [Elaeodendron orientale]
          Length = 353

 Score =  496 bits (1278), Expect = e-138
 Identities = 240/251 (95%), Positives = 240/251 (95%)
 Frame = +3

Query: 3   SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS 182
           SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS
Sbjct: 89  SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS 148

Query: 183 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMXXXXXXXX 362
           APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMM        
Sbjct: 149 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGA 208

Query: 363 XXXCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL 542
              CAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL
Sbjct: 209 ALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL 268

Query: 543 HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA 722
           HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA
Sbjct: 269 HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA 328

Query: 723 WMAAQDQPHEN 755
           WMAAQDQPHEN
Sbjct: 329 WMAAQDQPHEN 339


>gb|ADD30580.1| photosystem II protein D2 [Bulnesia arborea]
           gi|334085031|emb|CBR23733.1| photosystem II protein D2
           [Olea europaea subsp. cuspidata]
           gi|408899218|gb|AFU94443.1| PsbD, partial (chloroplast)
           [Erythroxylum areolatum]
          Length = 353

 Score =  496 bits (1278), Expect = e-138
 Identities = 240/251 (95%), Positives = 240/251 (95%)
 Frame = +3

Query: 3   SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS 182
           SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS
Sbjct: 89  SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS 148

Query: 183 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMXXXXXXXX 362
           APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMM        
Sbjct: 149 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGA 208

Query: 363 XXXCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL 542
              CAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL
Sbjct: 209 ALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL 268

Query: 543 HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA 722
           HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA
Sbjct: 269 HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA 328

Query: 723 WMAAQDQPHEN 755
           WMAAQDQPHEN
Sbjct: 329 WMAAQDQPHEN 339


>gb|AAQ09474.1| photosystem II D2 protein, partial (chloroplast) [Euonymus alatus]
          Length = 326

 Score =  496 bits (1278), Expect = e-138
 Identities = 240/251 (95%), Positives = 240/251 (95%)
 Frame = +3

Query: 3   SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS 182
           SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS
Sbjct: 62  SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS 121

Query: 183 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMXXXXXXXX 362
           APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMM        
Sbjct: 122 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGA 181

Query: 363 XXXCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL 542
              CAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL
Sbjct: 182 ALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL 241

Query: 543 HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA 722
           HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA
Sbjct: 242 HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA 301

Query: 723 WMAAQDQPHEN 755
           WMAAQDQPHEN
Sbjct: 302 WMAAQDQPHEN 312


>gb|AFA27489.1| photosystem II protein D2 [Syngonanthus chrysanthus]
          Length = 353

 Score =  496 bits (1276), Expect = e-138
 Identities = 239/251 (95%), Positives = 240/251 (95%)
 Frame = +3

Query: 3   SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS 182
           SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS
Sbjct: 89  SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAISFS 148

Query: 183 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMXXXXXXXX 362
           APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMM        
Sbjct: 149 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGA 208

Query: 363 XXXCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL 542
              CAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL
Sbjct: 209 ALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWL 268

Query: 543 HFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA 722
           HFFMLFVPVTGLWMSA+GVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA
Sbjct: 269 HFFMLFVPVTGLWMSAIGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRA 328

Query: 723 WMAAQDQPHEN 755
           WMAAQDQPHEN
Sbjct: 329 WMAAQDQPHEN 339


Top