BLASTX nr result

ID: Dioscorea21_contig00026697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026697
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                              189   2e-46
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]   155   4e-36
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   150   1e-34
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   150   1e-34
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   148   4e-34

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/172 (52%), Positives = 120/172 (69%), Gaps = 3/172 (1%)
 Frame = -1

Query: 508  FKIEYKPGRDNIAADALSRCFALTSSQPQELFFTELKLLQAQDSYYGPIMTQLQET---G 338
            FKIEYKPG+DN AADALSR F L  S+P  +F  EL+     D    P + QL ET   G
Sbjct: 988  FKIEYKPGKDNQAADALSRMFMLAWSEPHSIFLEELRARLISD----PHLKQLMETYKQG 1043

Query: 337  TGTSVYSLRQGILYWKGRLVIPDDNNLKQRLLHDFHSSLLGGHAGSLRTFMRIASQFFWK 158
               S Y++R+G+LYWK R+VIP +  +  ++L ++HSS +GGHAG  RT  R+ +QF+W 
Sbjct: 1044 ADASHYTVREGLLYWKDRVVIPAEEEIVNKILQEYHSSPIGGHAGITRTLARLKAQFYWP 1103

Query: 157  GMRREVHNFVQACMICQQAKSVTKPPSGLLQPLPIPQQIWEDIAMDFVCGLP 2
             M+ +V  ++Q C+ICQQAKS    P+GLLQPLPIPQQ+WED+AMDF+ GLP
Sbjct: 1104 KMQEDVKAYIQKCLICQQAKSNNTLPAGLLQPLPIPQQVWEDVAMDFITGLP 1155


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score =  155 bits (391), Expect = 4e-36
 Identities = 82/173 (47%), Positives = 116/173 (67%), Gaps = 4/173 (2%)
 Frame = -1

Query: 508 FKIEYKPGRDNIAADALSRC-FALTSSQ---PQELFFTELKLLQAQDSYYGPIMTQLQET 341
           ++I YKPGR+N A DALSR   +LT +     Q   + E+K   A D+Y   I ++L  T
Sbjct: 112 YEILYKPGRENSAVDALSRVPSSLTFNALFVSQAKIWEEIKTAAADDAYMTCI-SKLAAT 170

Query: 340 GTGTSVYSLRQGILYWKGRLVIPDDNNLKQRLLHDFHSSLLGGHAGSLRTFMRIASQFFW 161
             G   Y+ RQG+ ++K R+V+P  +++  +LL +FH S LGGH+G LRT+ RIA QF+W
Sbjct: 171 KPGLP-YTNRQGLTFYKNRVVVPPQSHIPNQLLREFHDSPLGGHSGVLRTYKRIAQQFYW 229

Query: 160 KGMRREVHNFVQACMICQQAKSVTKPPSGLLQPLPIPQQIWEDIAMDFVCGLP 2
             M R V+ +V +C +CQ+AK+ T  P+GLLQPLPIP Q+W+DI MDF+ GLP
Sbjct: 230 PSMYRMVNEYVSSCDVCQRAKASTLSPAGLLQPLPIPCQVWDDITMDFIEGLP 282


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  150 bits (379), Expect = 1e-34
 Identities = 79/176 (44%), Positives = 114/176 (64%), Gaps = 7/176 (3%)
 Frame = -1

Query: 508  FKIEYKPGRDNIAADALSR-------CFALTSSQPQELFFTELKLLQAQDSYYGPIMTQL 350
            F+I YKPG  N  ADALSR         A+ + Q  E  + EL+     DS+   +  +L
Sbjct: 1082 FEIHYKPGLSNRVADALSRKTVGEVELGAIVAVQGVE--WAELRREITGDSFLTQVRKEL 1139

Query: 349  QETGTGTSVYSLRQGILYWKGRLVIPDDNNLKQRLLHDFHSSLLGGHAGSLRTFMRIASQ 170
            QE G   S ++L  G L +KGR VIP  + +  +LL+++H + +GGHAG L+T++R+A++
Sbjct: 1140 QE-GRTPSHFTLVDGNLLFKGRYVIPSSSTIIPKLLYEYHDAPMGGHAGELKTYLRLAAE 1198

Query: 169  FFWKGMRREVHNFVQACMICQQAKSVTKPPSGLLQPLPIPQQIWEDIAMDFVCGLP 2
            ++W+GMR+EV  +V  C+ICQQ K   + P GLLQPLPIP  +WEDI+MDF+ GLP
Sbjct: 1199 WYWRGMRQEVARYVHQCLICQQQKVSQQHPRGLLQPLPIPSLVWEDISMDFIEGLP 1254


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  150 bits (378), Expect = 1e-34
 Identities = 76/175 (43%), Positives = 109/175 (62%), Gaps = 6/175 (3%)
 Frame = -1

Query: 508  FKIEYKPGRDNIAADALSR------CFALTSSQPQELFFTELKLLQAQDSYYGPIMTQLQ 347
            ++IEYKPG DN  ADALSR         LT + P  +  T LK    QD     I+    
Sbjct: 1106 YRIEYKPGVDNKVADALSRRPPTEALSQLTITGPPTIDLTALKAEIQQDHELSQILKNWA 1165

Query: 346  ETGTGTSVYSLRQGILYWKGRLVIPDDNNLKQRLLHDFHSSLLGGHAGSLRTFMRIASQF 167
            +     S +++  G++Y KG LVIP  +    ++L  FH+S +GGH G+L+TF R+ S+ 
Sbjct: 1166 QGDHHDSDFTVADGLIYRKGCLVIPVGSPFIPKMLEKFHTSPIGGHEGALKTFKRLTSEV 1225

Query: 166  FWKGMRREVHNFVQACMICQQAKSVTKPPSGLLQPLPIPQQIWEDIAMDFVCGLP 2
            +W+G+R++V N+++ C ICQ+ K  T  P+GLL PLPIPQQIW D+++DFV GLP
Sbjct: 1226 YWRGLRKDVVNYIKGCQICQENKYSTLSPAGLLSPLPIPQQIWSDVSLDFVEGLP 1280


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  148 bits (374), Expect = 4e-34
 Identities = 82/178 (46%), Positives = 112/178 (62%), Gaps = 9/178 (5%)
 Frame = -1

Query: 508  FKIEYKPGRDNIAADALSRCFA-------LTSSQP--QELFFTELKLLQAQDSYYGPIMT 356
            F+I+YKPG  N  ADALSR          LTSS    QEL    ++    QD+    +M 
Sbjct: 1014 FEIKYKPGGHNKVADALSRKHPPEAEYNLLTSSHSPHQELIAQAIR----QDADLQHLMA 1069

Query: 355  QLQETGTGTSVYSLRQGILYWKGRLVIPDDNNLKQRLLHDFHSSLLGGHAGSLRTFMRIA 176
            ++    T    +++  G+L + GRLVIP +  L   LL ++HSS +GGH+G  +T+ R+A
Sbjct: 1070 EVTAGRTPLQGFTVEHGLLKYNGRLVIPKNVPLTTTLLEEYHSSPMGGHSGIFKTYKRLA 1129

Query: 175  SQFFWKGMRREVHNFVQACMICQQAKSVTKPPSGLLQPLPIPQQIWEDIAMDFVCGLP 2
             +++WKGM+++V  FVQ C ICQQ K+ T  P+GLLQPLPIP  IWEDI+MDFV GLP
Sbjct: 1130 GEWYWKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDISMDFVEGLP 1187


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