BLASTX nr result

ID: Dioscorea21_contig00026649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026649
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japo...   119   3e-25
gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indi...   119   3e-25
gb|AFW66507.1| putative DNA-directed RNA polymerase family prote...   101   7e-20
ref|XP_002459158.1| hypothetical protein SORBIDRAFT_03g046922 [S...    97   1e-18
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218...    96   3e-18

>gb|EEE56320.1| hypothetical protein OsJ_05410 [Oryza sativa Japonica Group]
          Length = 2017

 Score =  119 bits (297), Expect = 3e-25
 Identities = 52/73 (71%), Positives = 65/73 (89%)
 Frame = +1

Query: 1    EHHPEKHAKVTDEIDYMMVDKHKNFQDSRCLYVVSSDGSSTDFSYLKCMENYVKIQFPEH 180
            EHHPEK +KV+ EID++MVDKH+ FQDSRCL+VVSSDG+ +DFSYLKCMEN+V+  +PEH
Sbjct: 1874 EHHPEKQSKVSGEIDHIMVDKHQVFQDSRCLFVVSSDGTRSDFSYLKCMENFVRKTYPEH 1933

Query: 181  AESFNRKYFKRRR 219
             +SF +KYFKRRR
Sbjct: 1934 GDSFCKKYFKRRR 1946


>gb|EEC72510.1| hypothetical protein OsI_05888 [Oryza sativa Indica Group]
          Length = 1867

 Score =  119 bits (297), Expect = 3e-25
 Identities = 52/73 (71%), Positives = 65/73 (89%)
 Frame = +1

Query: 1    EHHPEKHAKVTDEIDYMMVDKHKNFQDSRCLYVVSSDGSSTDFSYLKCMENYVKIQFPEH 180
            EHHPEK +KV+ EID++MVDKH+ FQDSRCL+VVSSDG+ +DFSYLKCMEN+V+  +PEH
Sbjct: 1724 EHHPEKQSKVSGEIDHIMVDKHQVFQDSRCLFVVSSDGTRSDFSYLKCMENFVRKTYPEH 1783

Query: 181  AESFNRKYFKRRR 219
             +SF +KYFKRRR
Sbjct: 1784 GDSFCKKYFKRRR 1796


>gb|AFW66507.1| putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 660

 Score =  101 bits (251), Expect = 7e-20
 Identities = 43/73 (58%), Positives = 58/73 (79%)
 Frame = +1

Query: 1   EHHPEKHAKVTDEIDYMMVDKHKNFQDSRCLYVVSSDGSSTDFSYLKCMENYVKIQFPEH 180
           EHHPEK +KV+ EIDY+ V+KH+ FQD+RC +VVS+DGS  DFSYLKC+EN+V+  + E 
Sbjct: 475 EHHPEKQSKVSGEIDYLTVNKHQTFQDTRCFFVVSTDGSQADFSYLKCLENFVRKSYTED 534

Query: 181 AESFNRKYFKRRR 219
           A++F  KY + RR
Sbjct: 535 ADTFCMKYLRPRR 547


>ref|XP_002459158.1| hypothetical protein SORBIDRAFT_03g046922 [Sorghum bicolor]
            gi|241931133|gb|EES04278.1| hypothetical protein
            SORBIDRAFT_03g046922 [Sorghum bicolor]
          Length = 1571

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 42/69 (60%), Positives = 55/69 (79%)
 Frame = +1

Query: 4    HHPEKHAKVTDEIDYMMVDKHKNFQDSRCLYVVSSDGSSTDFSYLKCMENYVKIQFPEHA 183
            +HPEK  K+  + +Y+MV+KH+ F  SRCLYV SSDGSS+DFSY KC+EN+++I +P  A
Sbjct: 1503 YHPEKEKKMAGQGNYIMVNKHQTFPSSRCLYVASSDGSSSDFSYKKCLENFIRIHYPHAA 1562

Query: 184  ESFNRKYFK 210
            ESF RKYFK
Sbjct: 1563 ESFCRKYFK 1571


>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1|
           Protein DCL [Medicago truncatula]
          Length = 481

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 42/71 (59%), Positives = 53/71 (74%)
 Frame = +1

Query: 1   EHHPEKHAKVTDEIDYMMVDKHKNFQDSRCLYVVSSDGSSTDFSYLKCMENYVKIQFPEH 180
           EHHP+K  K+   +D++MV KH NFQDSRCLYVV  DG   DFSY KC+EN V+ ++PE 
Sbjct: 336 EHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPET 395

Query: 181 AESFNRKYFKR 213
           AESF  KYF++
Sbjct: 396 AESFCGKYFRK 406


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