BLASTX nr result

ID: Dioscorea21_contig00026639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026639
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302398.1| predicted protein [Populus trichocarpa] gi|2...   197   9e-49
ref|XP_002510071.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   196   2e-48
ref|XP_002285420.1| PREDICTED: U-box domain-containing protein 3...   190   1e-46
emb|CAN70370.1| hypothetical protein VITISV_035398 [Vitis vinifera]   190   1e-46
ref|XP_004142902.1| PREDICTED: U-box domain-containing protein 3...   190   2e-46

>ref|XP_002302398.1| predicted protein [Populus trichocarpa] gi|222844124|gb|EEE81671.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  197 bits (502), Expect = 9e-49
 Identities = 101/155 (65%), Positives = 121/155 (78%), Gaps = 3/155 (1%)
 Frame = +1

Query: 133 MPQYQQQAH-SWRLE-GSGGQILDLETAVKDXXXXXXXXXXXXXX-EKVDLKKMIEEVDA 303
           MP YQ  +H + RL+ G+GGQILDLETA+KD               EK+DLKKMIEE+++
Sbjct: 1   MPMYQPNSHRNLRLDVGAGGQILDLETAIKDGILGGGGGLVCAGVTEKLDLKKMIEELES 60

Query: 304 AATEDIPTVFICPISLETMLDPVTLCTGQTYERPNILRWLSMGHRTCPTTMQELWDDALT 483
               ++P+VFICPISL+ M DPVTLCTGQTYER NIL+W S+GH TCPTTMQELWDD +T
Sbjct: 61  I---EVPSVFICPISLDPMQDPVTLCTGQTYERSNILKWFSLGHCTCPTTMQELWDDTVT 117

Query: 484 PNRTLQQLIHAWFSQRYLRIKKRSEDVQGRAAELL 588
           PNRTLQQLI++WFSQ+YL +KKRSEDV GRA ELL
Sbjct: 118 PNRTLQQLIYSWFSQKYLAMKKRSEDVLGRATELL 152


>ref|XP_002510071.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223550772|gb|EEF52258.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 451

 Score =  196 bits (498), Expect = 2e-48
 Identities = 100/160 (62%), Positives = 121/160 (75%), Gaps = 7/160 (4%)
 Frame = +1

Query: 133 MPQYQQQAH----SWRLE-GSGGQILDLETAVKDXXXXXXXXXXXXXX--EKVDLKKMIE 291
           MP YQ  +H    + +L+ GSGGQ+LDLETAVKD                EK+DLKKMIE
Sbjct: 1   MPMYQPNSHRREGNMKLDVGSGGQVLDLETAVKDGILGGSGGGLISTAGVEKLDLKKMIE 60

Query: 292 EVDAAATEDIPTVFICPISLETMLDPVTLCTGQTYERPNILRWLSMGHRTCPTTMQELWD 471
           E+++    D+P+VFICPISL+ M DPVTLCTGQTYER NIL+W   GH TCPTTMQELWD
Sbjct: 61  ELESL---DVPSVFICPISLDPMQDPVTLCTGQTYERSNILKWFCFGHYTCPTTMQELWD 117

Query: 472 DALTPNRTLQQLIHAWFSQRYLRIKKRSEDVQGRAAELLQ 591
           + +TPNRTLQQLI++WFSQ+YL +KKRSEDVQGRA E+L+
Sbjct: 118 NTVTPNRTLQQLIYSWFSQKYLAMKKRSEDVQGRAIEILE 157


>ref|XP_002285420.1| PREDICTED: U-box domain-containing protein 30 [Vitis vinifera]
          Length = 452

 Score =  190 bits (483), Expect = 1e-46
 Identities = 96/161 (59%), Positives = 117/161 (72%), Gaps = 8/161 (4%)
 Frame = +1

Query: 133 MPQYQQQAHS------WRLEGSGGQILDLETAVKDXXXXXXXXXXXXXX--EKVDLKKMI 288
           MP YQ           + + G GG +LDLETAVKD                EK+DLKKMI
Sbjct: 1   MPMYQPSGRRRDGGVMYDVGGDGGHVLDLETAVKDGILGGGGGVVCGSGVTEKLDLKKMI 60

Query: 289 EEVDAAATEDIPTVFICPISLETMLDPVTLCTGQTYERPNILRWLSMGHRTCPTTMQELW 468
           E++D+    D+P+VFICPISLE M DPVT+CTGQTYER NI++W SMGH TCPTTMQELW
Sbjct: 61  EDLDSI---DVPSVFICPISLEPMQDPVTICTGQTYERSNIVKWFSMGHFTCPTTMQELW 117

Query: 469 DDALTPNRTLQQLIHAWFSQRYLRIKKRSEDVQGRAAELLQ 591
           DD++TPN+TL QLI++WFSQ+YL +KKRSEDVQGRA E+L+
Sbjct: 118 DDSITPNKTLYQLIYSWFSQKYLVMKKRSEDVQGRALEVLE 158


>emb|CAN70370.1| hypothetical protein VITISV_035398 [Vitis vinifera]
          Length = 417

 Score =  190 bits (483), Expect = 1e-46
 Identities = 96/161 (59%), Positives = 117/161 (72%), Gaps = 8/161 (4%)
 Frame = +1

Query: 133 MPQYQQQAHS------WRLEGSGGQILDLETAVKDXXXXXXXXXXXXXX--EKVDLKKMI 288
           MP YQ           + + G GG +LDLETAVKD                EK+DLKKMI
Sbjct: 1   MPMYQPSGRRRDGGVMYDVGGDGGHVLDLETAVKDGILGGGGGVVCGSGVTEKLDLKKMI 60

Query: 289 EEVDAAATEDIPTVFICPISLETMLDPVTLCTGQTYERPNILRWLSMGHRTCPTTMQELW 468
           E++D+    D+P+VFICPISLE M DPVT+CTGQTYER NI++W SMGH TCPTTMQELW
Sbjct: 61  EDLDSI---DVPSVFICPISLEPMQDPVTICTGQTYERSNIVKWFSMGHFTCPTTMQELW 117

Query: 469 DDALTPNRTLQQLIHAWFSQRYLRIKKRSEDVQGRAAELLQ 591
           DD++TPN+TL QLI++WFSQ+YL +KKRSEDVQGRA E+L+
Sbjct: 118 DDSITPNKTLYQLIYSWFSQKYLVMKKRSEDVQGRALEVLE 158


>ref|XP_004142902.1| PREDICTED: U-box domain-containing protein 31-like [Cucumis
           sativus] gi|449494388|ref|XP_004159533.1| PREDICTED:
           U-box domain-containing protein 31-like [Cucumis
           sativus]
          Length = 455

 Score =  190 bits (482), Expect = 2e-46
 Identities = 99/163 (60%), Positives = 117/163 (71%), Gaps = 11/163 (6%)
 Frame = +1

Query: 133 MPQYQQQAHSWR------LEGSGGQILDLETAVKDXXXXXXXXXXXXXX-----EKVDLK 279
           MP YQ  A +WR      + G G QILDLET VKD                   EK+DLK
Sbjct: 1   MPMYQP-ATTWREGDPKLVVGCGTQILDLETVVKDGILGGGGGIICGGGGGGGGEKLDLK 59

Query: 280 KMIEEVDAAATEDIPTVFICPISLETMLDPVTLCTGQTYERPNILRWLSMGHRTCPTTMQ 459
           +MIEE++++   ++P+VFICPISLE M DPVTLC+GQTYER NIL+W S+GH TCPTTMQ
Sbjct: 60  EMIEELESSV--EVPSVFICPISLEPMQDPVTLCSGQTYERSNILKWFSLGHLTCPTTMQ 117

Query: 460 ELWDDALTPNRTLQQLIHAWFSQRYLRIKKRSEDVQGRAAELL 588
           ELWDD++TPNRTL QLIH WFSQ+YL +KKRSEDVQGR  ELL
Sbjct: 118 ELWDDSVTPNRTLHQLIHTWFSQKYLALKKRSEDVQGRVLELL 160


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