BLASTX nr result

ID: Dioscorea21_contig00026624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026624
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...   105   3e-21
emb|CBI27823.3| unnamed protein product [Vitis vinifera]              104   9e-21
gb|ACG39972.1| DNA binding protein [Zea mays]                          96   3e-18
ref|NP_001150257.1| DNA binding protein [Zea mays] gi|194702940|...    96   3e-18
emb|CAH66462.1| H0718E12.6 [Oryza sativa Indica Group] gi|116309...    95   7e-18

>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/101 (53%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
 Frame = -1

Query: 298 ITLPLRRQDSRCPEILDEEEFGKASESSVEDANKISPAETLGLMERSNEARLLFFQLPAS 119
           +TLPLRR  S  PE+LDEEEFG+ASES+  D N  +PA  LGLM+ + EA +LF QLPA+
Sbjct: 131 VTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMELGLMDENQEASMLFLQLPAT 190

Query: 118 LPQEKKSASP--KDGSGRILQDLPSGLMGKILVYRSGIVKM 2
           +P  K++A+   K+     L++LPSG MGK+LVY+SG +K+
Sbjct: 191 MPMIKQAATAEVKENKTCRLEELPSGFMGKMLVYKSGAIKL 231


>emb|CBI27823.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/99 (53%), Positives = 73/99 (73%)
 Frame = -1

Query: 298 ITLPLRRQDSRCPEILDEEEFGKASESSVEDANKISPAETLGLMERSNEARLLFFQLPAS 119
           +TLPLRR  S  PE+LDEEEFG+ASES+  D N  +PA  LGLM+ + EA +LF QLPA+
Sbjct: 141 VTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMELGLMDENQEASMLFLQLPAT 200

Query: 118 LPQEKKSASPKDGSGRILQDLPSGLMGKILVYRSGIVKM 2
           +P  K++A+ +      L++LPSG MGK+LVY+SG +K+
Sbjct: 201 MPMIKQAATAETCR---LEELPSGFMGKMLVYKSGAIKL 236


>gb|ACG39972.1| DNA binding protein [Zea mays]
          Length = 300

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/115 (46%), Positives = 76/115 (66%), Gaps = 16/115 (13%)
 Frame = -1

Query: 298 ITLPLRRQDSRCPEILDEEEFGKASESSVEDANKISPAETLGLMERSNEARLLFFQLPAS 119
           +TLPLR+  S  PEILDEEEFG++S S  +D +++S AE LGLM+ S+E++ LFFQLP+S
Sbjct: 128 VTLPLRKPYSGNPEILDEEEFGESSASRTQD-DELSAAEQLGLMDMSSESQFLFFQLPSS 186

Query: 118 LP----------------QEKKSASPKDGSGRILQDLPSGLMGKILVYRSGIVKM 2
           LP                ++++   P   +G  L+++P G MGK+LVY+SG VKM
Sbjct: 187 LPLPRQPQSVADPNEVRDEKREGMRPSSHNGSKLKEVPEGYMGKMLVYKSGKVKM 241


>ref|NP_001150257.1| DNA binding protein [Zea mays] gi|194702940|gb|ACF85554.1| unknown
           [Zea mays] gi|195637872|gb|ACG38404.1| DNA binding
           protein [Zea mays] gi|414587522|tpg|DAA38093.1| TPA: DNA
           binding protein [Zea mays]
          Length = 300

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/115 (46%), Positives = 76/115 (66%), Gaps = 16/115 (13%)
 Frame = -1

Query: 298 ITLPLRRQDSRCPEILDEEEFGKASESSVEDANKISPAETLGLMERSNEARLLFFQLPAS 119
           +TLPLR+  S  PEILDEEEFG++S S  +D +++S AE LGLM+ S+E++ LFFQLP+S
Sbjct: 128 VTLPLRKPYSGNPEILDEEEFGESSASRTQD-DELSAAEQLGLMDMSSESQFLFFQLPSS 186

Query: 118 LP----------------QEKKSASPKDGSGRILQDLPSGLMGKILVYRSGIVKM 2
           LP                ++++   P   +G  L+++P G MGK+LVY+SG VKM
Sbjct: 187 LPLPRQPQSGADPNEVRDEKREDMRPSSHNGSKLKEVPEGYMGKMLVYKSGKVKM 241


>emb|CAH66462.1| H0718E12.6 [Oryza sativa Indica Group] gi|116309384|emb|CAH66463.1|
           H0718E12.7 [Oryza sativa Indica Group]
          Length = 308

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 59/126 (46%), Positives = 74/126 (58%), Gaps = 27/126 (21%)
 Frame = -1

Query: 298 ITLPLRRQDSRCPEILDEEEFGKASESSVEDANKISPAETLGLMERSNEARLLFFQLPAS 119
           +TLPLRR  S  PEIL+EEEFG++S +  +D  +++ AE LGLM RS++A+LLFFQ+PAS
Sbjct: 125 VTLPLRRPYSGDPEILNEEEFGESSATGAQDG-ELTTAEELGLMHRSDKAQLLFFQMPAS 183

Query: 118 LPQEKKSAS---------------------------PKDGSGRILQDLPSGLMGKILVYR 20
           LP  K+  S                           P    G  L+DLP G MGKILVYR
Sbjct: 184 LPLPKQPDSVAETDKGDGVDAEPTSTSSKEMHAGTRPPKVLGSKLKDLPEGFMGKILVYR 243

Query: 19  SGIVKM 2
           SG VKM
Sbjct: 244 SGKVKM 249


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