BLASTX nr result

ID: Dioscorea21_contig00026616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026616
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513375.1| pentatricopeptide repeat-containing protein,...    72   4e-11
ref|XP_004139834.1| PREDICTED: uncharacterized protein LOC101214...    70   1e-10
ref|XP_002307188.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002310675.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002336594.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10

>ref|XP_002513375.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547283|gb|EEF48778.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 922

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   LSSEQARDQFSGFMKDWNNHKLDSRYYEGIASGPRTAHNWKIR 131
           LSSE AR+ F+ F+KDWNN KLD +YYEGI+SGPR+AHNW  R
Sbjct: 106 LSSESAREMFTDFVKDWNNQKLDPQYYEGISSGPRSAHNWTFR 148


>ref|XP_004139834.1| PREDICTED: uncharacterized protein LOC101214792 [Cucumis sativus]
          Length = 158

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 30/43 (69%), Positives = 38/43 (88%)
 Frame = +3

Query: 3   LSSEQARDQFSGFMKDWNNHKLDSRYYEGIASGPRTAHNWKIR 131
           LSSE AR+ FS F++ WN+ KL+SRYYEGI+SGPRT+HNWKI+
Sbjct: 115 LSSESARELFSDFVELWNDRKLESRYYEGISSGPRTSHNWKIK 157


>ref|XP_002307188.1| predicted protein [Populus trichocarpa] gi|222856637|gb|EEE94184.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +3

Query: 3   LSSEQARDQFSGFMKDWNNHKLDSRYYEGIASGPRTAHNWKIR 131
           L+SE AR+ FS F+KDWN  KL+SRYYEGI+SGPR+AHNW ++
Sbjct: 116 LTSESARELFSVFVKDWNAQKLESRYYEGISSGPRSAHNWALK 158


>ref|XP_002310675.1| predicted protein [Populus trichocarpa] gi|222853578|gb|EEE91125.1|
           predicted protein [Populus trichocarpa]
          Length = 81

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/44 (65%), Positives = 37/44 (84%)
 Frame = +3

Query: 3   LSSEQARDQFSGFMKDWNNHKLDSRYYEGIASGPRTAHNWKIRK 134
           LSSE AR+ FS F+KDWN+ KL+SRYYEGI+S PR+AHNW  ++
Sbjct: 38  LSSESARELFSVFVKDWNSQKLESRYYEGISSAPRSAHNWAFKR 81


>ref|XP_002336594.1| predicted protein [Populus trichocarpa] gi|222836274|gb|EEE74695.1|
           predicted protein [Populus trichocarpa]
          Length = 76

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +3

Query: 3   LSSEQARDQFSGFMKDWNNHKLDSRYYEGIASGPRTAHNWKIR 131
           L+SE AR+ FS F+KDWN  KL+SRYYEGI+SGPR+AHNW ++
Sbjct: 33  LTSESARELFSVFVKDWNAQKLESRYYEGISSGPRSAHNWALK 75


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