BLASTX nr result

ID: Dioscorea21_contig00026609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026609
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601396.1| Membrane protein, putative [Medicago truncat...    68   7e-10
ref|XP_002525329.1| Transmembrane protein, putative [Ricinus com...    67   1e-09
ref|XP_004140119.1| PREDICTED: uncharacterized protein LOC101208...    64   1e-08
ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256...    64   1e-08
emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]    64   1e-08

>ref|XP_003601396.1| Membrane protein, putative [Medicago truncatula]
           gi|355490444|gb|AES71647.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 475

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
 Frame = -1

Query: 240 DAPADEISPFLADDGDRPPRKMSIFSVSYPNKNRPPKEPIQRAADMEVNLFSH-ILWVWN 64
           D   D+I+P L+   DRP  K++IF+ SYP + +P ++ + R  + E + F+  ILW+WN
Sbjct: 38  DNAHDQIAPLLSHT-DRP--KINIFTASYPRRKQP-RDEVTRLLESETSPFTQCILWIWN 93

Query: 63  GSRYSGVLCMVSASTIYLIM 4
           GSRYSG+LCM  +S +Y +M
Sbjct: 94  GSRYSGLLCMALSSFLYFLM 113


>ref|XP_002525329.1| Transmembrane protein, putative [Ricinus communis]
           gi|223535388|gb|EEF37062.1| Transmembrane protein,
           putative [Ricinus communis]
          Length = 425

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = -1

Query: 237 APADEISPFLADDGDRPPRKMSIFSVSYPNKNRPPKEPIQRAADMEVNLFSH-ILWVWNG 61
           +P+DEI+P L         K++IFSVS+    R P+E + +  + E   F   ILWVW+G
Sbjct: 44  SPSDEITPLLKP-------KINIFSVSH--SRRKPREQVAKLPETETPPFIQLILWVWSG 94

Query: 60  SRYSGVLCMVSASTIYLIME 1
           SRYSG+LCM  +S+IY +ME
Sbjct: 95  SRYSGILCMALSSSIYFVME 114


>ref|XP_004140119.1| PREDICTED: uncharacterized protein LOC101208388 [Cucumis sativus]
           gi|449481153|ref|XP_004156097.1| PREDICTED:
           uncharacterized protein LOC101226055 [Cucumis sativus]
          Length = 392

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
 Frame = -1

Query: 249 INDDAP-ADEISPFLADDGDRPPRKMSIFSVSYPNKNRPPKEPIQRAADMEVNLFSH-IL 76
           I DD P ++EI+P L    ++P  K++IF++SYP   R P E + +  D +V+  S  I+
Sbjct: 24  IADDVPISEEIAPLLTQI-EKP--KINIFTISYPR--RTPMEQVNKVHDSDVSSLSQSII 78

Query: 75  WVWNGSRYSGVLCMVSASTIYLIME 1
           W+W+GSRYSG+LC   +S  Y  ME
Sbjct: 79  WIWSGSRYSGLLCASLSSIFYFAME 103


>ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256852 [Vitis vinifera]
           gi|297739206|emb|CBI28857.3| unnamed protein product
           [Vitis vinifera]
          Length = 390

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = -1

Query: 231 ADEISPFLADDGDRPPRKMSIFSVSYPNKNRPPKEPIQRAADMEVNLFSHILWVWNGSRY 52
           ++EI P LA   ++P  K++IFSVSY    R P+E + ++A+ + +    ILW W+GSR 
Sbjct: 33  SEEIEPLLAVS-EKP--KINIFSVSY--SRRKPREQVTKSAE-DASFTQFILWAWSGSRC 86

Query: 51  SGVLCMVSASTIYLIME 1
           SG+LCM  +STIY IME
Sbjct: 87  SGLLCMALSSTIYCIME 103


>emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]
          Length = 413

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = -1

Query: 231 ADEISPFLADDGDRPPRKMSIFSVSYPNKNRPPKEPIQRAADMEVNLFSHILWVWNGSRY 52
           ++EI P LA   ++P  K++IFSVSY    R P+E + ++A+ + +    ILW W+GSR 
Sbjct: 33  SEEIEPLLAVS-EKP--KINIFSVSY--SRRKPREQVTKSAE-DASFTQFILWAWSGSRC 86

Query: 51  SGVLCMVSASTIYLIME 1
           SG+LCM  +STIY IME
Sbjct: 87  SGLLCMALSSTIYCIME 103


Top