BLASTX nr result

ID: Dioscorea21_contig00026577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026577
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADF46135.1| reverse transcriptase [Eleocharis palustris subsp...   117   1e-24
gb|ADF46071.1| reverse transcriptase [Eleocharis palustris]           117   1e-24
gb|ADF46069.1| reverse transcriptase [Eleocharis palustris]           117   1e-24
gb|ADF46052.1| reverse transcriptase [Eleocharis mamillata]           117   1e-24
gb|ADF46072.1| reverse transcriptase [Eleocharis palustris]           116   2e-24

>gb|ADF46135.1| reverse transcriptase [Eleocharis palustris subsp. waltersii]
          Length = 143

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = +2

Query: 2   VMPFGLTNAPSTFQSLMNSVFRQVLRKFVLIFFDDILVYSPDWSSHMTHLREVLERLRTH 181
           VMPFGLTNAP+TFQ LMNS+F+  LRKFVL+FFDDILVYS D +SH+ HLR+VLE LRTH
Sbjct: 71  VMPFGLTNAPATFQCLMNSIFKPFLRKFVLVFFDDILVYSSDLTSHLNHLRQVLEVLRTH 130

Query: 182 HLFAKISKCEFG 217
            LF K SKCEFG
Sbjct: 131 QLFVKKSKCEFG 142


>gb|ADF46071.1| reverse transcriptase [Eleocharis palustris]
          Length = 143

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = +2

Query: 2   VMPFGLTNAPSTFQSLMNSVFRQVLRKFVLIFFDDILVYSPDWSSHMTHLREVLERLRTH 181
           VMPFGLTNAP+TFQ LMNS+F+  LRKFVL+FFDDILVYS D +SH+ HLR+VLE LRTH
Sbjct: 71  VMPFGLTNAPATFQCLMNSIFKPFLRKFVLVFFDDILVYSSDLTSHLNHLRQVLEVLRTH 130

Query: 182 HLFAKISKCEFG 217
            LF K SKCEFG
Sbjct: 131 QLFVKKSKCEFG 142


>gb|ADF46069.1| reverse transcriptase [Eleocharis palustris]
          Length = 143

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = +2

Query: 2   VMPFGLTNAPSTFQSLMNSVFRQVLRKFVLIFFDDILVYSPDWSSHMTHLREVLERLRTH 181
           VMPFGLTNAP+TFQ LMNS+F+  LRKFVL+FFDDILVYS D +SH+ HLR+VLE LRTH
Sbjct: 71  VMPFGLTNAPATFQCLMNSIFKPFLRKFVLVFFDDILVYSSDLTSHLNHLRQVLEVLRTH 130

Query: 182 HLFAKISKCEFG 217
            LF K SKCEFG
Sbjct: 131 QLFVKKSKCEFG 142


>gb|ADF46052.1| reverse transcriptase [Eleocharis mamillata]
          Length = 143

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/72 (76%), Positives = 62/72 (86%)
 Frame = +2

Query: 2   VMPFGLTNAPSTFQSLMNSVFRQVLRKFVLIFFDDILVYSPDWSSHMTHLREVLERLRTH 181
           VMPFGLTNAP+TFQ LMNS+F+  LRKFVL+FFDDILVYS D +SH+ HLR+VLE LRTH
Sbjct: 71  VMPFGLTNAPATFQCLMNSIFKPFLRKFVLVFFDDILVYSSDLTSHLNHLRQVLEVLRTH 130

Query: 182 HLFAKISKCEFG 217
            LF K SKCEFG
Sbjct: 131 QLFVKKSKCEFG 142


>gb|ADF46072.1| reverse transcriptase [Eleocharis palustris]
          Length = 143

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/72 (76%), Positives = 61/72 (84%)
 Frame = +2

Query: 2   VMPFGLTNAPSTFQSLMNSVFRQVLRKFVLIFFDDILVYSPDWSSHMTHLREVLERLRTH 181
           VMPFGLTNAP TFQ LMNS+F+  LRKFVL+FFDDILVYS D +SH+ HLR+VLE LRTH
Sbjct: 71  VMPFGLTNAPKTFQCLMNSIFKPFLRKFVLVFFDDILVYSSDLTSHLNHLRQVLEVLRTH 130

Query: 182 HLFAKISKCEFG 217
            LF K SKCEFG
Sbjct: 131 QLFVKKSKCEFG 142


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