BLASTX nr result

ID: Dioscorea21_contig00026558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026558
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3...   224   2e-56
ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3...   224   2e-56
ref|XP_002306856.1| predicted protein [Populus trichocarpa] gi|2...   216   4e-54
ref|XP_002532036.1| ubiquitin-protein ligase, putative [Ricinus ...   207   2e-51
ref|XP_002302042.1| predicted protein [Populus trichocarpa] gi|2...   203   3e-50

>ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3-like isoform 2 [Vitis
           vinifera]
          Length = 757

 Score =  224 bits (570), Expect = 2e-56
 Identities = 115/196 (58%), Positives = 140/196 (71%)
 Frame = -3

Query: 750 IQQCMQELQCVEQGRTSELIEIALKDECENVTPSLEDIIKIMENLGLTSNRELLMESIAL 571
           IQ CMQ+LQ +EQ R SE IE AL+ + + + P  + + KI+E+L LTS +ELL ES+A+
Sbjct: 130 IQHCMQKLQHLEQKRISEYIEQALRSQRDEIIPHTQQLAKIIESLSLTSKQELLKESVAV 189

Query: 570 EKERIRAELKKKTEYSDHIYQIIRLVSHFRHCMANIEQLGFLNGKPIPSYFRCPLSLELM 391
           E+ER+ A++ K     D I QI+ LVSH R CM  +     +NG  IPSYFRCPLSLELM
Sbjct: 190 ERERMNAQVNKTAYELDQINQIVELVSHIRDCMVRLGGFEAINGVRIPSYFRCPLSLELM 249

Query: 390 VDPVIVASGQTYERSFIQKWLDNGLRICPNTRQPLDHINLIQNFTVKALIANWCEENNIK 211
           +DPVIVASGQTYERS IQKWLD GL ICP TRQ L H NLI N+TVKALI NWCEENNI 
Sbjct: 250 MDPVIVASGQTYERSSIQKWLDQGLMICPKTRQTLAHANLIPNYTVKALIENWCEENNIT 309

Query: 210 LSDSIQSEIISLPFSP 163
           LS + +   I+   SP
Sbjct: 310 LSGTSEHTNITPVPSP 325


>ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3-like isoform 1 [Vitis
           vinifera]
          Length = 764

 Score =  224 bits (570), Expect = 2e-56
 Identities = 115/196 (58%), Positives = 140/196 (71%)
 Frame = -3

Query: 750 IQQCMQELQCVEQGRTSELIEIALKDECENVTPSLEDIIKIMENLGLTSNRELLMESIAL 571
           IQ CMQ+LQ +EQ R SE IE AL+ + + + P  + + KI+E+L LTS +ELL ES+A+
Sbjct: 130 IQHCMQKLQHLEQKRISEYIEQALRSQRDEIIPHTQQLAKIIESLSLTSKQELLKESVAV 189

Query: 570 EKERIRAELKKKTEYSDHIYQIIRLVSHFRHCMANIEQLGFLNGKPIPSYFRCPLSLELM 391
           E+ER+ A++ K     D I QI+ LVSH R CM  +     +NG  IPSYFRCPLSLELM
Sbjct: 190 ERERMNAQVNKTAYELDQINQIVELVSHIRDCMVRLGGFEAINGVRIPSYFRCPLSLELM 249

Query: 390 VDPVIVASGQTYERSFIQKWLDNGLRICPNTRQPLDHINLIQNFTVKALIANWCEENNIK 211
           +DPVIVASGQTYERS IQKWLD GL ICP TRQ L H NLI N+TVKALI NWCEENNI 
Sbjct: 250 MDPVIVASGQTYERSSIQKWLDQGLMICPKTRQTLAHANLIPNYTVKALIENWCEENNIT 309

Query: 210 LSDSIQSEIISLPFSP 163
           LS + +   I+   SP
Sbjct: 310 LSGTSEHTNITPVPSP 325


>ref|XP_002306856.1| predicted protein [Populus trichocarpa] gi|222856305|gb|EEE93852.1|
           predicted protein [Populus trichocarpa]
          Length = 748

 Score =  216 bits (550), Expect = 4e-54
 Identities = 107/188 (56%), Positives = 140/188 (74%), Gaps = 1/188 (0%)
 Frame = -3

Query: 750 IQQCMQELQCVEQGRTSELIEIALKDECENVTPSLEDIIKIMENLGLTSNRELLMESIAL 571
           +Q CMQELQ ++    +ELIE AL+   ++V+P    ++K+ E LGLTSN+ELL ES+A+
Sbjct: 130 VQHCMQELQGLKHETITELIEEALRSLSDDVSPCTNHLMKLTETLGLTSNQELLKESVAV 189

Query: 570 EKERIRAELKKKTEYSDHIYQIIRLVSHFRHCMANIEQLGFLNGKPIPSYFRCPLSLELM 391
           EKER+  ++ K     D I QI+ L+SH R+ +  +E+    +G PIP YFRCPLSLELM
Sbjct: 190 EKERMNVKVNKAKGDLDQIDQIVDLISHIRNWLLKVERFDPKSGAPIPPYFRCPLSLELM 249

Query: 390 VDPVIVASGQTYERSFIQKWLDNGLRICPNTRQPLDHINLIQNFTVKALIANWCEENNIK 211
           +DPVIVASGQTY+R  IQKWLD+GL ICP TRQ L H NLI N+TVKA+IANWCEENN++
Sbjct: 250 LDPVIVASGQTYDRVSIQKWLDHGLSICPRTRQTLSHTNLIPNYTVKAMIANWCEENNVR 309

Query: 210 L-SDSIQS 190
           + SDS+ S
Sbjct: 310 VSSDSVPS 317


>ref|XP_002532036.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223528306|gb|EEF30352.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 753

 Score =  207 bits (527), Expect = 2e-51
 Identities = 104/192 (54%), Positives = 145/192 (75%), Gaps = 1/192 (0%)
 Frame = -3

Query: 750 IQQCMQELQCVEQGRTSELIEIALKDECENVTPSLEDIIKIMENLGLTSNRELLMESIAL 571
           IQ CMQELQ ++Q   +E IE A++++ + V P  + ++KI+++L LTS +E+L ES+A+
Sbjct: 130 IQHCMQELQSLKQEMMTEHIEEAVRNKRDEVVPCSDPLVKIIQSLSLTSGQEILKESVAV 189

Query: 570 EKERIRAELKKKTEYSDHIYQIIRLVSHFRHCMANIEQLGFLNGKPIPSYFRCPLSLELM 391
           EKER+  ++ K     D I QI+ L+S  R+C+  IE++   +G  IPSYFRCPLSLELM
Sbjct: 190 EKERMNIQVNKAKGDLDQINQIVDLISDIRNCLLKIERVDPKSGVLIPSYFRCPLSLELM 249

Query: 390 VDPVIVASGQTYERSFIQKWLDNGLRICPNTRQPLDHINLIQNFTVKALIANWCEENNIK 211
           +DPVIVASGQTYER+ IQKWL++GL ICP TR+ L H NLI N+TVKA+I+NWCEEN+I+
Sbjct: 250 LDPVIVASGQTYERASIQKWLEHGLTICPKTRKTLAHSNLIPNYTVKAMISNWCEENHIR 309

Query: 210 -LSDSIQSEIIS 178
             S+S Q ++IS
Sbjct: 310 PSSNSKQDDLIS 321


>ref|XP_002302042.1| predicted protein [Populus trichocarpa] gi|222843768|gb|EEE81315.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score =  203 bits (517), Expect = 3e-50
 Identities = 99/182 (54%), Positives = 130/182 (71%)
 Frame = -3

Query: 750 IQQCMQELQCVEQGRTSELIEIALKDECENVTPSLEDIIKIMENLGLTSNRELLMESIAL 571
           +Q CMQELQ ++    +E+IE AL+   ++V P  + ++K++E L LTSN+ELL ES+A+
Sbjct: 130 VQHCMQELQGLKHETITEIIEEALRGLKDDVVPCTDHLMKLIETLSLTSNQELLKESVAV 189

Query: 570 EKERIRAELKKKTEYSDHIYQIIRLVSHFRHCMANIEQLGFLNGKPIPSYFRCPLSLELM 391
           EKER    + K   Y   I QI+ L++  R  +  +E     +G PIP YFRCPLSLELM
Sbjct: 190 EKERTNVHINKAEGYLYQIDQIVDLITQIRSWLLKVEHRDPKSGAPIPPYFRCPLSLELM 249

Query: 390 VDPVIVASGQTYERSFIQKWLDNGLRICPNTRQPLDHINLIQNFTVKALIANWCEENNIK 211
           +DPVIVASGQTY+R  IQKWLD+GL  CP TRQ L H NLI N+TVKA+IANWCEENN++
Sbjct: 250 LDPVIVASGQTYDRVSIQKWLDHGLTFCPRTRQTLSHTNLIPNYTVKAMIANWCEENNVR 309

Query: 210 LS 205
           +S
Sbjct: 310 VS 311


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