BLASTX nr result

ID: Dioscorea21_contig00026538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026538
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit...   207   9e-52
ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic ...   207   9e-52
ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S...   207   9e-52
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   205   3e-51
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              205   3e-51

>gb|AFW71549.1| putative DNA polymerase epsilon catalytic subunit family protein
           [Zea mays]
          Length = 1856

 Score =  207 bits (526), Expect = 9e-52
 Identities = 97/101 (96%), Positives = 99/101 (98%)
 Frame = -3

Query: 304 IGFQCDQNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 125
           IGFQCD NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
Sbjct: 95  IGFQCDNNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 154

Query: 124 RFAMEKPQIMASYSVSDAVSTYYLYMTYVHPFIFSLATIIP 2
           RFAME+PQ MASYSVSDAV+TYYLYMTYVHPFIFSLATIIP
Sbjct: 155 RFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIP 195


>ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Brachypodium
           distachyon]
          Length = 2127

 Score =  207 bits (526), Expect = 9e-52
 Identities = 97/101 (96%), Positives = 99/101 (98%)
 Frame = -3

Query: 304 IGFQCDQNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 125
           IGFQCD NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
Sbjct: 386 IGFQCDDNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 445

Query: 124 RFAMEKPQIMASYSVSDAVSTYYLYMTYVHPFIFSLATIIP 2
           RFAME+PQ MASYSVSDAV+TYYLYMTYVHPFIFSLATIIP
Sbjct: 446 RFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIP 486


>ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
           gi|241931984|gb|EES05129.1| hypothetical protein
           SORBIDRAFT_04g020730 [Sorghum bicolor]
          Length = 2135

 Score =  207 bits (526), Expect = 9e-52
 Identities = 97/101 (96%), Positives = 99/101 (98%)
 Frame = -3

Query: 304 IGFQCDQNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 125
           IGFQCD NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
Sbjct: 372 IGFQCDNNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 431

Query: 124 RFAMEKPQIMASYSVSDAVSTYYLYMTYVHPFIFSLATIIP 2
           RFAME+PQ MASYSVSDAV+TYYLYMTYVHPFIFSLATIIP
Sbjct: 432 RFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIP 472


>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
           vinifera]
          Length = 2214

 Score =  205 bits (522), Expect = 3e-51
 Identities = 96/101 (95%), Positives = 99/101 (98%)
 Frame = -3

Query: 304 IGFQCDQNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 125
           +GFQCD+NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
Sbjct: 359 VGFQCDKNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 418

Query: 124 RFAMEKPQIMASYSVSDAVSTYYLYMTYVHPFIFSLATIIP 2
           RFA E PQ+MASYSVSDAVSTYYLYMTYVHPFIFSLATIIP
Sbjct: 419 RFAKELPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIP 459


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  205 bits (522), Expect = 3e-51
 Identities = 96/101 (95%), Positives = 99/101 (98%)
 Frame = -3

Query: 304 IGFQCDQNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 125
           +GFQCD+NQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
Sbjct: 415 VGFQCDKNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV 474

Query: 124 RFAMEKPQIMASYSVSDAVSTYYLYMTYVHPFIFSLATIIP 2
           RFA E PQ+MASYSVSDAVSTYYLYMTYVHPFIFSLATIIP
Sbjct: 475 RFAKELPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIP 515


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