BLASTX nr result

ID: Dioscorea21_contig00026530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026530
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|2...   341   3e-91
ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [R...   340   5e-91
ref|XP_002276173.1| PREDICTED: probable GMP synthase [glutamine-...   340   6e-91
ref|XP_003549544.1| PREDICTED: probable GMP synthase [glutamine-...   339   8e-91
ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|2...   338   1e-90

>ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|222865972|gb|EEF03103.1|
            predicted protein [Populus trichocarpa]
          Length = 380

 Score =  341 bits (874), Expect = 3e-91
 Identities = 181/343 (52%), Positives = 213/343 (62%), Gaps = 7/343 (2%)
 Frame = +2

Query: 293  MAGAPRVRSLNIADLEVRPVFGPAGNNXXXXXXXXXXXXX----TRKAGDAKKVVASAPA 460
            M+GAPRVRS+N+AD E R V GP GNN                   K+ +  K+      
Sbjct: 1    MSGAPRVRSMNVADSEARSVLGPTGNNKAGPLSARKPVSKQSRKVEKSPEEVKLGEEKKT 60

Query: 461  PTMXXXXXXXXXXXXXXXXXXXRRQEXXXXXXXXXXXXXXXXXXTDSFRSRASTGRIGRP 640
             T+                   RR E                  TDSF SRASTGR+ R 
Sbjct: 61   LTVPAVGTLSPKSHSLNISSVLRRHELLLHSNLSLNASCSSDASTDSFHSRASTGRLTRS 120

Query: 641  GSAG-RWKHSGLKPEKIAAKLEKIVQDGG--AMPQPEARTGKRRCAWVTPNTEPCYAAFH 811
             SAG R K   L+P          V +GG  + P P+    K+ CAWVTPNT+PCYA FH
Sbjct: 121  NSAGTRRKQYVLRPRSF-------VSEGGLESPPSPDDSQSKKSCAWVTPNTDPCYATFH 173

Query: 812  DGEWGVPVHDDKKXXXXXXXXXXXXXXTWPAILGKRHIFREVFMDFDPVAVSKLNEKKVI 991
            D EWGVP+HDD+K              TWPAIL KRHIFREVF DFDP+AVSK NEKK++
Sbjct: 174  DEEWGVPIHDDRKLFELLVLSGALAELTWPAILSKRHIFREVFADFDPIAVSKFNEKKIL 233

Query: 992  SPRSTASSLLSEPKLRAIIENSRHILKIVEEFGSFDRYCWGFVNHKPITNRFRYPRQVPV 1171
            +P STA+SLLSE KLRAI+EN+R I K+++EFGSFD+Y W FVN+KPI +RFRYPRQVPV
Sbjct: 234  APGSTATSLLSELKLRAIVENARQISKVIDEFGSFDKYIWSFVNYKPIVSRFRYPRQVPV 293

Query: 1172 KSPKADVISKDLVKRGFRCVGPMVVYSFMQVAGITNDHLISCF 1300
            K+PKAD ISKDLV+RGFR VGP V+YSFMQVAGITNDHLISCF
Sbjct: 294  KTPKADAISKDLVRRGFRSVGPTVIYSFMQVAGITNDHLISCF 336


>ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
            gi|223531126|gb|EEF32974.1| DNA-3-methyladenine
            glycosylase, putative [Ricinus communis]
          Length = 380

 Score =  340 bits (872), Expect = 5e-91
 Identities = 184/343 (53%), Positives = 211/343 (61%), Gaps = 7/343 (2%)
 Frame = +2

Query: 293  MAGAPRVRSLNIADLEVRPVFGPAGNNXXXXXXXXXXXXXTRK----AGDAKKVVASAPA 460
            M+GAPRVRS+N+AD E RPV GP GNN               +    + +A K+      
Sbjct: 1    MSGAPRVRSMNVADSETRPVLGPTGNNKAGSLSAKKPASKQLRKVETSPEAVKLGQEKKL 60

Query: 461  PTMXXXXXXXXXXXXXXXXXXXRRQEXXXXXXXXXXXXXXXXXXTDSFRSRASTGRIGRP 640
             T+                   RR E                  TDSF SRASTGR+ R 
Sbjct: 61   VTVPTASALSPKSHSVSVPSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLTRS 120

Query: 641  GSAG-RWKHSGLKPEKIAAKLEKIVQDGG--AMPQPEARTGKRRCAWVTPNTEPCYAAFH 811
             S G R K   LKP  +       V DGG  + P  +    K+ CAWVTPN +PCY AFH
Sbjct: 121  NSLGTRRKQYALKPRSV-------VSDGGLESPPPSDGSQAKKSCAWVTPNADPCYTAFH 173

Query: 812  DGEWGVPVHDDKKXXXXXXXXXXXXXXTWPAILGKRHIFREVFMDFDPVAVSKLNEKKVI 991
            D EWG+PVHDDKK              TWPAIL KRHIFREVF +FDPV VSK NEKK+I
Sbjct: 174  DEEWGIPVHDDKKLFELLVLSGALAELTWPAILSKRHIFREVFANFDPVVVSKFNEKKII 233

Query: 992  SPRSTASSLLSEPKLRAIIENSRHILKIVEEFGSFDRYCWGFVNHKPITNRFRYPRQVPV 1171
            +P STASSLLSE KLRAIIEN+R I K+ +E GSFD+Y W FVN+KPI +RFRYPRQVPV
Sbjct: 234  APGSTASSLLSEIKLRAIIENARQISKVTDELGSFDKYIWSFVNYKPIVSRFRYPRQVPV 293

Query: 1172 KSPKADVISKDLVKRGFRCVGPMVVYSFMQVAGITNDHLISCF 1300
            K+PKADVISKDLV+RGFR VGP VVYSFMQVAG+TNDHLISCF
Sbjct: 294  KTPKADVISKDLVRRGFRSVGPTVVYSFMQVAGLTNDHLISCF 336


>ref|XP_002276173.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing] [Vitis
            vinifera] gi|297743642|emb|CBI36525.3| unnamed protein
            product [Vitis vinifera]
          Length = 375

 Score =  340 bits (871), Expect = 6e-91
 Identities = 184/337 (54%), Positives = 207/337 (61%), Gaps = 1/337 (0%)
 Frame = +2

Query: 293  MAGAPRVRSLNIADLEVRPVFGPAGNNXXXXXXXXXXXXXT-RKAGDAKKVVASAPAPTM 469
            M+G PRVRS+N+AD EVRPV GPAGN                RKA  A K      A   
Sbjct: 1    MSGGPRVRSMNVADSEVRPVLGPAGNKTMRSLSGRKPATKPLRKAEKATKDDEEIKALPS 60

Query: 470  XXXXXXXXXXXXXXXXXXXRRQEXXXXXXXXXXXXXXXXXXTDSFRSRASTGRIGRPGSA 649
                               RRQE                  TDSF SRASTGRI R  S 
Sbjct: 61   SNGAASSPPSHSVSVPLVLRRQEQLLHSNLSLNASCSSDASTDSFHSRASTGRITRSSST 120

Query: 650  GRWKHSGLKPEKIAAKLEKIVQDGGAMPQPEARTGKRRCAWVTPNTEPCYAAFHDGEWGV 829
             R +    KP+ I       V DG +   P+    KRRCAWVTPNT+  Y AFHD EWGV
Sbjct: 121  ARRRSYASKPKVI-------VSDGVSESPPDGLKAKRRCAWVTPNTDLSYIAFHDEEWGV 173

Query: 830  PVHDDKKXXXXXXXXXXXXXXTWPAILGKRHIFREVFMDFDPVAVSKLNEKKVISPRSTA 1009
            PVHDDKK              TWP IL KRHIFREVF DFDP+AV+KLNEKK+++P S A
Sbjct: 174  PVHDDKKLFELLVLSGALAELTWPTILSKRHIFREVFADFDPIAVAKLNEKKLMAPGSIA 233

Query: 1010 SSLLSEPKLRAIIENSRHILKIVEEFGSFDRYCWGFVNHKPITNRFRYPRQVPVKSPKAD 1189
            SSL+SE KLR IIEN+R + K+++EFGSFD Y W FVNHKPI +RFRYPR VPVK+PKAD
Sbjct: 234  SSLISELKLRGIIENARQMSKVIDEFGSFDEYIWSFVNHKPIVSRFRYPRHVPVKTPKAD 293

Query: 1190 VISKDLVKRGFRCVGPMVVYSFMQVAGITNDHLISCF 1300
            VISKDLV+RGFR VGP V+YSFMQVAGITNDHLISCF
Sbjct: 294  VISKDLVRRGFRSVGPTVIYSFMQVAGITNDHLISCF 330


>ref|XP_003549544.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
            [Glycine max]
          Length = 373

 Score =  339 bits (870), Expect = 8e-91
 Identities = 183/334 (54%), Positives = 208/334 (62%), Gaps = 2/334 (0%)
 Frame = +2

Query: 305  PRVRSLNIADLEV-RPVFGPAGNNXXXXXXXXXXXXXTRKAGDAKKVVASAPAPTMXXXX 481
            PR+RS+N+ D E  RPVFGPAGN               RKA   +K+   A         
Sbjct: 4    PRLRSMNVGDSEAARPVFGPAGNKTGSLSSRKTASKPLRKA---EKLYNEAKEKKKSYEM 60

Query: 482  XXXXXXXXXXXXXXXRRQEXXXXXXXXXXXXXXXXXXTDSFRSRASTGRIGRPGSAG-RW 658
                           RR E                  TDSF SRASTGR+ R  S G   
Sbjct: 61   SSVVASPQSHSASVLRRHEQLLHCNLSLNASCSSDASTDSFHSRASTGRLTRSNSLGCTR 120

Query: 659  KHSGLKPEKIAAKLEKIVQDGGAMPQPEARTGKRRCAWVTPNTEPCYAAFHDGEWGVPVH 838
            K S  KP  +A+       DG     P     K+RCAW+TPNTEPCYA FHD EWGVPVH
Sbjct: 121  KRSVSKPRSVAS-------DGVLESPPHGSQSKKRCAWITPNTEPCYATFHDEEWGVPVH 173

Query: 839  DDKKXXXXXXXXXXXXXXTWPAILGKRHIFREVFMDFDPVAVSKLNEKKVISPRSTASSL 1018
            DDKK              +WPAIL KRHIFREVF+DFDPVAVSK NEKK+++P STASSL
Sbjct: 174  DDKKLFELLVLSSALSELSWPAILSKRHIFREVFVDFDPVAVSKFNEKKIMAPGSTASSL 233

Query: 1019 LSEPKLRAIIENSRHILKIVEEFGSFDRYCWGFVNHKPITNRFRYPRQVPVKSPKADVIS 1198
            LS+ KLRAIIEN+R I K++EEFGSFD+Y W FVNHKPI +RFRYPRQVPVK+PKADVIS
Sbjct: 234  LSDLKLRAIIENARQISKVIEEFGSFDKYIWSFVNHKPIISRFRYPRQVPVKTPKADVIS 293

Query: 1199 KDLVKRGFRCVGPMVVYSFMQVAGITNDHLISCF 1300
            KDLV+RGFR VGP V+YSFMQV G+TNDHLISCF
Sbjct: 294  KDLVRRGFRGVGPTVIYSFMQVVGLTNDHLISCF 327


>ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|222855322|gb|EEE92869.1|
            predicted protein [Populus trichocarpa]
          Length = 381

 Score =  338 bits (868), Expect = 1e-90
 Identities = 176/343 (51%), Positives = 212/343 (61%), Gaps = 7/343 (2%)
 Frame = +2

Query: 293  MAGAPRVRSLNIADLEVRPVFGPAGNNXXXXXXXXXXXXXTRKAGDAK-----KVVASAP 457
            M+GAPRVRS+N+AD E RPV GP GN               +   D K     K+     
Sbjct: 1    MSGAPRVRSMNVADSEARPVLGPTGNTKAGPLTSARKPASKQLRKDGKSPEEAKLGEEKK 60

Query: 458  APTMXXXXXXXXXXXXXXXXXXXRRQEXXXXXXXXXXXXXXXXXXTDSFRSRASTGRIGR 637
              T+                   RR E                  TDSF SRASTGR+ R
Sbjct: 61   VLTVPTVGNLSPKSLSGNFSSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLIR 120

Query: 638  PGSAGRWKHSGLKPEKIAAKLEKIVQDGG--AMPQPEARTGKRRCAWVTPNTEPCYAAFH 811
              + G       + ++  +K   +V DGG  ++P  +    K+ CAWVTPNT+PCY AFH
Sbjct: 121  SNNVGT------RRKQYVSKPRSVVSDGGLESLPSSDGSQSKKSCAWVTPNTDPCYTAFH 174

Query: 812  DGEWGVPVHDDKKXXXXXXXXXXXXXXTWPAILGKRHIFREVFMDFDPVAVSKLNEKKVI 991
            D EWG+PVHDD+K              TWPAIL KRH+FREVF DFDP+AVSK NEKK+I
Sbjct: 175  DEEWGLPVHDDRKLFELLVLSGALAELTWPAILSKRHMFREVFADFDPIAVSKFNEKKII 234

Query: 992  SPRSTASSLLSEPKLRAIIENSRHILKIVEEFGSFDRYCWGFVNHKPITNRFRYPRQVPV 1171
            +P STA+SLLSE KLRAIIEN+R I K+++EFGSFD+Y W FVN+KPI +RFRYPRQVP 
Sbjct: 235  APGSTAASLLSELKLRAIIENARQISKVIDEFGSFDKYIWSFVNYKPIVSRFRYPRQVPA 294

Query: 1172 KSPKADVISKDLVKRGFRCVGPMVVYSFMQVAGITNDHLISCF 1300
            K+PKAD ISKDLV+RGFR VGP V+YSFMQVAG+TNDHLISCF
Sbjct: 295  KTPKADAISKDLVRRGFRSVGPTVIYSFMQVAGVTNDHLISCF 337


Top