BLASTX nr result

ID: Dioscorea21_contig00026527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026527
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   234   2e-59
emb|CBI27406.3| unnamed protein product [Vitis vinifera]              234   2e-59
ref|XP_002514579.1| pentatricopeptide repeat-containing protein,...   216   7e-54
ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat...   203   5e-50
gb|AAG13570.1|AC037425_1 putative membrane-associated salt-induc...   199   9e-49

>ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  234 bits (598), Expect = 2e-59
 Identities = 115/213 (53%), Positives = 156/213 (73%)
 Frame = -3

Query: 641 FVEGMVGLRHGLEDFRVSQFERCHGLARKGRLKEMRAVLRQIIDEEGSGSAPFLCELLLN 462
           F+  ++   +G    RVS F   H +ARKG+ KE+R VL Q+++EEGSGSAP LCELL N
Sbjct: 100 FLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCN 159

Query: 461 NFQGWDFSSLVWDMLANVYARSEMVHDAVVVLRQMDGLNMQASISSYDSLMYNLRHTYLI 282
           +F+ WD +++VWDMLA  Y+R+EMVHDA+ VL +M  LN+Q SI++Y+SL+YNLRHT ++
Sbjct: 160 SFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIM 219

Query: 281 WDIYEVIGAQGISCSGYTYNIFIDGLCKQRKLQEAISFFQEVRTRKEFNSCIVTFNTLMS 102
           WD+Y  I A G+  + YT  I IDGLC+Q +LQ+A++F +E    +EF   +V+FN LMS
Sbjct: 220 WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRET-GGEEFGPSVVSFNALMS 278

Query: 101 GSCNVGSVRIAKSFLSMMLKYGYLPDRYSYNTL 3
           G C +GSV +AKSF  MM+KYG LPD YSYN L
Sbjct: 279 GFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNIL 311


>emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  234 bits (598), Expect = 2e-59
 Identities = 115/213 (53%), Positives = 156/213 (73%)
 Frame = -3

Query: 641 FVEGMVGLRHGLEDFRVSQFERCHGLARKGRLKEMRAVLRQIIDEEGSGSAPFLCELLLN 462
           F+  ++   +G    RVS F   H +ARKG+ KE+R VL Q+++EEGSGSAP LCELL N
Sbjct: 100 FLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCN 159

Query: 461 NFQGWDFSSLVWDMLANVYARSEMVHDAVVVLRQMDGLNMQASISSYDSLMYNLRHTYLI 282
           +F+ WD +++VWDMLA  Y+R+EMVHDA+ VL +M  LN+Q SI++Y+SL+YNLRHT ++
Sbjct: 160 SFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIM 219

Query: 281 WDIYEVIGAQGISCSGYTYNIFIDGLCKQRKLQEAISFFQEVRTRKEFNSCIVTFNTLMS 102
           WD+Y  I A G+  + YT  I IDGLC+Q +LQ+A++F +E    +EF   +V+FN LMS
Sbjct: 220 WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRET-GGEEFGPSVVSFNALMS 278

Query: 101 GSCNVGSVRIAKSFLSMMLKYGYLPDRYSYNTL 3
           G C +GSV +AKSF  MM+KYG LPD YSYN L
Sbjct: 279 GFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNIL 311


>ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546183|gb|EEF47685.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 840

 Score =  216 bits (550), Expect = 7e-54
 Identities = 109/203 (53%), Positives = 141/203 (69%)
 Frame = -3

Query: 611 GLEDFRVSQFERCHGLARKGRLKEMRAVLRQIIDEEGSGSAPFLCELLLNNFQGWDFSSL 432
           G +  R S+    H LARK RL E+R VL Q++  EGSGSAP LCELLL +F+ WD S++
Sbjct: 121 GFQHSRFSRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAPSLCELLLGSFRSWDSSNV 180

Query: 431 VWDMLANVYARSEMVHDAVVVLRQMDGLNMQASISSYDSLMYNLRHTYLIWDIYEVIGAQ 252
           VWDMLA  Y+RS MVHDA+ VL +M  LN   SI +Y+SL+YNLRH+ ++WD+Y  I   
Sbjct: 181 VWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVS 240

Query: 251 GISCSGYTYNIFIDGLCKQRKLQEAISFFQEVRTRKEFNSCIVTFNTLMSGSCNVGSVRI 72
           G   S YT +I +DGLC+Q + Q+A+ FFQ+    KEF   +V+FNT+MS  C +G V +
Sbjct: 241 GTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTE-GKEFQPSVVSFNTIMSRYCKLGFVDV 299

Query: 71  AKSFLSMMLKYGYLPDRYSYNTL 3
           AKSF  MMLK+G LPD YSYN L
Sbjct: 300 AKSFFCMMLKHGLLPDAYSYNIL 322


>ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Brachypodium distachyon]
          Length = 795

 Score =  203 bits (517), Expect = 5e-50
 Identities = 100/191 (52%), Positives = 139/191 (72%)
 Frame = -3

Query: 575 CHGLARKGRLKEMRAVLRQIIDEEGSGSAPFLCELLLNNFQGWDFSSLVWDMLANVYARS 396
           C+ L ++ R +EMR  L Q++ E+GSGSA  LC++L N F+  D SS++WD LAN YAR+
Sbjct: 89  CYELLQQRRWREMRGALAQMVTEQGSGSAAILCDILRNGFRECDPSSIMWDALANSYARA 148

Query: 395 EMVHDAVVVLRQMDGLNMQASISSYDSLMYNLRHTYLIWDIYEVIGAQGISCSGYTYNIF 216
           +M+HDA+ VL +M+ LNMQ S+S+YDSL+Y LR T +  +++E + A GIS S Y+++I 
Sbjct: 149 QMIHDALYVLSKMNSLNMQISVSTYDSLLYGLRMTDMALELFEEMEAYGISKSEYSHSII 208

Query: 215 IDGLCKQRKLQEAISFFQEVRTRKEFNSCIVTFNTLMSGSCNVGSVRIAKSFLSMMLKYG 36
           IDGLCKQ K+ EA+SF QE R  + F    ++FN LMS  CN G ++ AKSFL +MLKYG
Sbjct: 209 IDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALCNWGFIQPAKSFLCLMLKYG 268

Query: 35  YLPDRYSYNTL 3
             PDRY+Y+TL
Sbjct: 269 LNPDRYTYSTL 279


>gb|AAG13570.1|AC037425_1 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 811

 Score =  199 bits (506), Expect = 9e-49
 Identities = 99/197 (50%), Positives = 140/197 (71%)
 Frame = -3

Query: 593 VSQFERCHGLARKGRLKEMRAVLRQIIDEEGSGSAPFLCELLLNNFQGWDFSSLVWDMLA 414
           V++ + CH L R+ R + MRA L Q++ E+GSGSA  LC++L N F+  D +  VWD LA
Sbjct: 99  VARIKLCHELLRERRWRAMRAALAQLVTEQGSGSAAALCDILWNRFRECDSNGCVWDALA 158

Query: 413 NVYARSEMVHDAVVVLRQMDGLNMQASISSYDSLMYNLRHTYLIWDIYEVIGAQGISCSG 234
           N YAR++MVHDA+ VL +M  LNMQ S+ +YDSL++ LR T +  +++E + + G+S S 
Sbjct: 159 NSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLRMTDVALELFEEMESCGVSPSE 218

Query: 233 YTYNIFIDGLCKQRKLQEAISFFQEVRTRKEFNSCIVTFNTLMSGSCNVGSVRIAKSFLS 54
           Y+++I I+GLCKQ K+ EA+SF QE R   +F    +TFN LMS  CN G V+ AKSFL 
Sbjct: 219 YSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSAKSFLC 278

Query: 53  MMLKYGYLPDRYSYNTL 3
           +MLKYG +PDRY+++TL
Sbjct: 279 LMLKYGLVPDRYTFSTL 295



 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
 Frame = -3

Query: 419 LANVYAR----SEMVHDAVVVLRQMDGLNMQASISSYDSLMYNLRHTYLIWDIYEVIGAQ 252
           LA  Y R    S ++  AV     MD L+    +++  SL             ++ + A+
Sbjct: 553 LAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSL-------------FDEMVAK 599

Query: 251 GISCSGYTYNIFIDGLCKQRKLQEAISFFQEVRTRKEFNSCIVTFNTLMSGSCNVGSVRI 72
            I  +  TY++ + GLCKQ +  EAI+  +++ + K  N+  +T+NTL+ G C   +V++
Sbjct: 600 RIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDS-KGINADPITYNTLIQGFCESENVQM 658

Query: 71  AKSFLSMMLKYGYLPDRYSYNTL 3
           A     +ML  G +P   +YN L
Sbjct: 659 AFHIHDIMLCRGLVPTPVTYNLL 681


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