BLASTX nr result

ID: Dioscorea21_contig00026508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026508
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001047854.1| Os02g0703300 [Oryza sativa Japonica Group] g...    64   2e-08
ref|XP_003572856.1| PREDICTED: uncharacterized protein LOC100837...    64   2e-08
ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago ...    62   4e-08
ref|NP_001132786.1| uncharacterized protein LOC100194275 [Zea ma...    61   8e-08
ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266...    59   4e-07

>ref|NP_001047854.1| Os02g0703300 [Oryza sativa Japonica Group]
           gi|41052702|dbj|BAD07560.1| unknown protein [Oryza
           sativa Japonica Group] gi|41053126|dbj|BAD08069.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113537385|dbj|BAF09768.1| Os02g0703300 [Oryza sativa
           Japonica Group] gi|125540807|gb|EAY87202.1| hypothetical
           protein OsI_08606 [Oryza sativa Indica Group]
           gi|125583385|gb|EAZ24316.1| hypothetical protein
           OsJ_08068 [Oryza sativa Japonica Group]
           gi|215701248|dbj|BAG92672.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740992|dbj|BAG97487.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765678|dbj|BAG87375.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 202

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/83 (39%), Positives = 50/83 (60%)
 Frame = -2

Query: 282 RRAVLLMVLFLGSVSFSCCIXXXXXXXXXXEMKLDGSLCALRQSPALGLGITALVCLSIA 103
           R A+  +V+ L + +FSC +          +MKLDGSLC+L +S A  LG+ A+  LS+A
Sbjct: 11  RAAICGIVVLLCATAFSCSLAAEFRKVKEKDMKLDGSLCSLPKSSAFELGVAAIAFLSVA 70

Query: 102 QMVGTSMAAARICPKHRKSGGLT 34
           Q+VGT+ AA  +C   ++S   T
Sbjct: 71  QLVGTTAAATTMCAASKRSKSST 93


>ref|XP_003572856.1| PREDICTED: uncharacterized protein LOC100837186 [Brachypodium
           distachyon]
          Length = 209

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/79 (41%), Positives = 48/79 (60%)
 Frame = -2

Query: 282 RRAVLLMVLFLGSVSFSCCIXXXXXXXXXXEMKLDGSLCALRQSPALGLGITALVCLSIA 103
           R A+  +V+ L + +FSC +          +MKLDGSLC+L +S A  LG+ A+  LS+A
Sbjct: 11  RAAICGIVVLLCATAFSCSLAAEFHKVKEKDMKLDGSLCSLPRSSAFELGVAAIAFLSVA 70

Query: 102 QMVGTSMAAARICPKHRKS 46
           Q+VGT+ AA  +C    KS
Sbjct: 71  QLVGTTAAATTMCASKSKS 89


>ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago truncatula]
           gi|355513829|gb|AES95452.1| hypothetical protein
           MTR_5g025640 [Medicago truncatula]
          Length = 183

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/81 (38%), Positives = 46/81 (56%)
 Frame = -2

Query: 270 LLMVLFLGSVSFSCCIXXXXXXXXXXEMKLDGSLCALRQSPALGLGITALVCLSIAQMVG 91
           +++ +FLG VSF+ CI          +++ +G LC L  S A GLGI ALVCL +AQ++G
Sbjct: 15  IIISIFLGLVSFTLCIASEITKNKMDDLRWNGKLCYLPSSQAYGLGIAALVCLFLAQIIG 74

Query: 90  TSMAAARICPKHRKSGGLTAP 28
            SM     C + +K+     P
Sbjct: 75  NSMLFKNSCSRRKKNAQYKLP 95


>ref|NP_001132786.1| uncharacterized protein LOC100194275 [Zea mays]
           gi|194695394|gb|ACF81781.1| unknown [Zea mays]
           gi|194701048|gb|ACF84608.1| unknown [Zea mays]
           gi|195616492|gb|ACG30076.1| hypothetical protein [Zea
           mays] gi|413938441|gb|AFW72992.1| hypothetical protein
           ZEAMMB73_627704 [Zea mays] gi|413938442|gb|AFW72993.1|
           hypothetical protein ZEAMMB73_627704 [Zea mays]
          Length = 208

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
 Frame = -2

Query: 282 RRAVLLMVLFLGSVSFSCCIXXXXXXXXXXEMKLDGSLCALRQSPALGLGITALVCLSIA 103
           R A+  +V+ L +V+FSC +          +MKLDGSLC+L +S A  LG+ A+  L +A
Sbjct: 11  RAAICGIVVLLCAVAFSCSLAAEFRKVKEKDMKLDGSLCSLPRSSAFELGVAAIAFLFVA 70

Query: 102 QMVGTSMAAARIC---PKHRKS 46
           Q+VGT+ A +  C   PK R+S
Sbjct: 71  QLVGTTAAVSTACAAEPKKRQS 92


>ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266552 [Vitis vinifera]
           gi|296085473|emb|CBI29205.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = -2

Query: 264 MVLFLGSVSFSCCIXXXXXXXXXXEMKLDGSLCALRQSPALGLGITALVCLSIAQMVGTS 85
           ++ FLG ++F  C+          ++KL+G LC L +S A  LG+ AL+CL IA ++G  
Sbjct: 14  IIAFLGLMAFGLCVAAEFKRSKKKDVKLNGKLCYLAESGAFQLGVAALICLFIAHILGNM 73

Query: 84  MAAARICPKHRKSGG-LTAPGTTNHMLAI 1
           +   RIC   + S G    P  T+ +L +
Sbjct: 74  VICRRICSGEKSSSGKAKTPWITSTLLVV 102


Top