BLASTX nr result

ID: Dioscorea21_contig00026486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026486
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306533.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002321474.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
emb|CAC95122.1| 60I2G03 [Populus deltoides]                            55   5e-06
ref|XP_002323759.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002306533.1| predicted protein [Populus trichocarpa] gi|222855982|gb|EEE93529.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = +1

Query: 13  GREVGYSEIFQVTHKRKGGEGEFVDNKS*VVSEKYNAAIVDKYGDDTSSHPTFDGQSWSD 192
           G+E  + ++F   H+     G FVDNKS  V E Y   ++ KYG +  +HP+FDG +W  
Sbjct: 357 GKEPPWDDVFSALHQSAKQSGSFVDNKSKKVVENYKMEMISKYGTNRENHPSFDGAAWCV 416

Query: 193 AIGGLKTTSTSVYG 234
           A GG+  T   VYG
Sbjct: 417 ASGGV--TKGRVYG 428


>ref|XP_002321474.1| predicted protein [Populus trichocarpa] gi|222868470|gb|EEF05601.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +1

Query: 4   EKLG-REVGYSEIFQVTHKRKGGEGEFVDNKS*VVSEKYNAAIVDKYGDDTSSHPTFDGQ 180
           E++G +E  + ++F   H+     G FVDNKS  V E Y   ++ KYG +  +HP+FDG 
Sbjct: 67  EEVGEKEPSWDDVFSALHQSTKQSGSFVDNKSKKVVENYKMEMISKYGTNRENHPSFDGA 126

Query: 181 SWSDAIGGLKTTSTSVYG 234
           +W  A GG+  T   VYG
Sbjct: 127 AWCVASGGV--TKGRVYG 142


>emb|CAC95122.1| 60I2G03 [Populus deltoides]
          Length = 408

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   AEKLGREVGYSEIFQVTH----KRKGGEGEFVDNKS*VVSEKYNAAIVDKYGDDTSSHPT 168
           A  LGRE    E+F  TH     R+ G  +FVDN++    E YN+ + ++YGD+ S+HP 
Sbjct: 234 AASLGREPSPMELFLETHVRSQDRQKGVQQFVDNRAQHFVETYNSRLRERYGDNPSTHPD 293

Query: 169 FDGQSWSDAIGGLKTTSTSVYG 234
           FD   W +A          VYG
Sbjct: 294 FDPDLWMEAGSSGGPDKNRVYG 315


>ref|XP_002323759.1| predicted protein [Populus trichocarpa] gi|222866761|gb|EEF03892.1|
           predicted protein [Populus trichocarpa]
          Length = 579

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/73 (36%), Positives = 39/73 (53%)
 Frame = +1

Query: 13  GREVGYSEIFQVTHKRKGGEGEFVDNKS*VVSEKYNAAIVDKYGDDTSSHPTFDGQSWSD 192
           G+E  + ++F   H+     G FVD KS  V E Y   ++ KYG +  +HP+FDG +W  
Sbjct: 479 GKEPPWDDVFSALHQSTKQSGSFVDYKSKKVVENYKMEMISKYGTNRENHPSFDGAAWCV 538

Query: 193 AIGGLKTTSTSVY 231
           A G  + T   VY
Sbjct: 539 ASG--EVTKGRVY 549


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