BLASTX nr result

ID: Dioscorea21_contig00026442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026442
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7XD96.2|DCL3B_ORYSJ RecName: Full=Endoribonuclease Dicer hom...   133   2e-29
gb|ABB20894.1| dicer-like protein [Oryza sativa Indica Group]         130   9e-29
ref|NP_001064898.2| Os10g0485600 [Oryza sativa Japonica Group] g...   128   4e-28
gb|EEE51167.1| hypothetical protein OsJ_31945 [Oryza sativa Japo...   128   4e-28
gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]    128   6e-28

>sp|Q7XD96.2|DCL3B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3b; AltName:
            Full=Dicer-like protein 3b; Short=OsDCL3b
          Length = 1637

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/106 (59%), Positives = 82/106 (77%)
 Frame = +2

Query: 2    IAGAVLIDSNLNLDKVWEVFKPLLSPLISPDKLVLPPYRELIELSSHIGCFLKINCANKA 181
            IAGAV ID++ N+D VWE+F+PLLSPLI+PDKL LPPYREL+EL SHIGCFL   C +K 
Sbjct: 1380 IAGAVFIDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSKCTSKG 1439

Query: 182  GNCAAEIALQLKDDMLVGHGCDSNRKGAKAQAAICLLKALKERGIS 319
                 E++LQL+D++LV  G D N+K AKA+AA  +L  LK++G+S
Sbjct: 1440 EEVIIEMSLQLRDELLVAQGHDRNKKRAKAKAASRILADLKQQGLS 1485


>gb|ABB20894.1| dicer-like protein [Oryza sativa Indica Group]
          Length = 1116

 Score =  130 bits (328), Expect = 9e-29
 Identities = 63/106 (59%), Positives = 83/106 (78%)
 Frame = +2

Query: 2    IAGAVLIDSNLNLDKVWEVFKPLLSPLISPDKLVLPPYRELIELSSHIGCFLKINCANKA 181
            IAGAV +D++ N+D VWE+F+PLLSPLI+PDKL LPPYREL+EL SHIGCFL   C +K 
Sbjct: 860  IAGAVFLDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSECTSK- 918

Query: 182  GNCAAEIALQLKDDMLVGHGCDSNRKGAKAQAAICLLKALKERGIS 319
            G    E++LQL+D++LV  G D N+K AKA+AA  +L  LK++G+S
Sbjct: 919  GEVIIEMSLQLRDELLVAQGHDRNKKRAKAKAASRILADLKQQGLS 964


>ref|NP_001064898.2| Os10g0485600 [Oryza sativa Japonica Group]
            gi|18087887|gb|AAL59041.1|AC087182_24 putative RNA
            helicase [Oryza sativa Japonica Group]
            gi|31432753|gb|AAP54346.1| Type III restriction enzyme,
            res subunit family protein, expressed [Oryza sativa
            Japonica Group] gi|255679506|dbj|BAF26812.2| Os10g0485600
            [Oryza sativa Japonica Group]
          Length = 1458

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/103 (59%), Positives = 79/103 (76%)
 Frame = +2

Query: 2    IAGAVLIDSNLNLDKVWEVFKPLLSPLISPDKLVLPPYRELIELSSHIGCFLKINCANKA 181
            IAGAV ID++ N+D VWE+F+PLLSPLI+PDKL LPPYREL+EL SHIGCFL   C +K 
Sbjct: 1243 IAGAVFIDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSKCTSKG 1302

Query: 182  GNCAAEIALQLKDDMLVGHGCDSNRKGAKAQAAICLLKALKER 310
                 E++LQL+D++LV  G D N+K AKA+AA  +L  LK++
Sbjct: 1303 EEVIIEMSLQLRDELLVAQGHDRNKKRAKAKAASRILADLKQQ 1345


>gb|EEE51167.1| hypothetical protein OsJ_31945 [Oryza sativa Japonica Group]
          Length = 1570

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/103 (59%), Positives = 79/103 (76%)
 Frame = +2

Query: 2    IAGAVLIDSNLNLDKVWEVFKPLLSPLISPDKLVLPPYRELIELSSHIGCFLKINCANKA 181
            IAGAV ID++ N+D VWE+F+PLLSPLI+PDKL LPPYREL+EL SHIGCFL   C +K 
Sbjct: 1312 IAGAVFIDTDFNVDMVWEIFEPLLSPLITPDKLALPPYRELLELCSHIGCFLNSKCTSKG 1371

Query: 182  GNCAAEIALQLKDDMLVGHGCDSNRKGAKAQAAICLLKALKER 310
                 E++LQL+D++LV  G D N+K AKA+AA  +L  LK++
Sbjct: 1372 EEVIIEMSLQLRDELLVAQGHDRNKKRAKAKAASRILADLKQQ 1414


>gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]
          Length = 596

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/106 (58%), Positives = 79/106 (74%)
 Frame = +2

Query: 2   IAGAVLIDSNLNLDKVWEVFKPLLSPLISPDKLVLPPYRELIELSSHIGCFLKINCANKA 181
           IAGA+L+D+ LNLD+VW++ KPLLSP+++PDKL LPP RELIEL   +G FLK +C  K 
Sbjct: 320 IAGAILVDTKLNLDEVWKIVKPLLSPIVTPDKLELPPLRELIELCDSLGYFLKDHCMVKG 379

Query: 182 GNCAAEIALQLKDDMLVGHGCDSNRKGAKAQAAICLLKALKERGIS 319
               AE+ LQLKD++LV  GC   RK AK QAA+ LLK L+ +GIS
Sbjct: 380 DTVHAELRLQLKDELLVAEGCGQTRKNAKGQAALKLLKDLEHKGIS 425


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