BLASTX nr result

ID: Dioscorea21_contig00026439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026439
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD16965.1| growth-regulating factor 1-like [Oryza sativa Ja...    80   2e-13
gb|EAZ24805.1| hypothetical protein OsJ_08584 [Oryza sativa Japo...    80   2e-13
ref|NP_001048288.1| Os02g0776900 [Oryza sativa Japonica Group] g...    80   2e-13
sp|A2XA73.1|GRF1_ORYSI RecName: Full=Growth-regulating factor 1;...    79   5e-13
ref|XP_002273821.2| PREDICTED: uncharacterized protein LOC100247...    75   4e-12

>dbj|BAD16965.1| growth-regulating factor 1-like [Oryza sativa Japonica Group]
           gi|46806156|dbj|BAD17386.1| growth-regulating factor
           1-like [Oryza sativa Japonica Group]
          Length = 170

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
 Frame = -3

Query: 360 KEESGKQHCFVLGADFKLEKPVKEDREKV---PLRHFFDEWPQKSKESSPWMDLEEHSSS 190
           +++  +QHCF+LGAD +LEKP   D       PLRHFFDEWP +      WM LE     
Sbjct: 88  QQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPHEKNSKGSWMGLE----G 143

Query: 189 KTQLSISIP--------AMTSRYHNED 133
           +TQLS+SIP          TSRYHN+D
Sbjct: 144 ETQLSMSIPMAANDLPITTTSRYHNDD 170


>gb|EAZ24805.1| hypothetical protein OsJ_08584 [Oryza sativa Japonica Group]
          Length = 360

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
 Frame = -3

Query: 360 KEESGKQHCFVLGADFKLEKPVKEDREKV---PLRHFFDEWPQKSKESSPWMDLEEHSSS 190
           +++  +QHCF+LGAD +LEKP   D       PLRHFFDEWP +      WM LE     
Sbjct: 278 QQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPDEKNSKGSWMGLE----G 333

Query: 189 KTQLSISIP--------AMTSRYHNED 133
           +TQLS+SIP          TSRYHN+D
Sbjct: 334 ETQLSMSIPMAANDLPITTTSRYHNDD 360


>ref|NP_001048288.1| Os02g0776900 [Oryza sativa Japonica Group]
           gi|75120360|sp|Q6AWY8.1|GRF1_ORYSJ RecName:
           Full=Growth-regulating factor 1; Short=OsGRF1; AltName:
           Full=Transcription activator GRF1
           gi|51039831|tpg|DAA05205.1| TPA_exp: growth-regulating
           factor 1 [Oryza sativa (japonica cultivar-group)]
           gi|113537819|dbj|BAF10202.1| Os02g0776900 [Oryza sativa
           Japonica Group]
          Length = 397

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
 Frame = -3

Query: 360 KEESGKQHCFVLGADFKLEKPVKEDREKV---PLRHFFDEWPQKSKESSPWMDLEEHSSS 190
           +++  +QHCF+LGAD +LEKP   D       PLRHFFDEWP +      WM LE     
Sbjct: 315 QQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPHEKNSKGSWMGLE----G 370

Query: 189 KTQLSISIP--------AMTSRYHNED 133
           +TQLS+SIP          TSRYHN+D
Sbjct: 371 ETQLSMSIPMAANDLPITTTSRYHNDD 397


>sp|A2XA73.1|GRF1_ORYSI RecName: Full=Growth-regulating factor 1; Short=OsGRF1; AltName:
           Full=Transcription activator GRF1
           gi|6573149|gb|AAF17567.1|AF201895_1 growth-regulating
           factor 1 [Oryza sativa] gi|125541338|gb|EAY87733.1|
           hypothetical protein OsI_09149 [Oryza sativa Indica
           Group]
          Length = 396

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
 Frame = -3

Query: 360 KEESGKQHCFVLGADFKLEKPVKEDREKV---PLRHFFDEWPQKSKESSPWMDLEEHSSS 190
           +++  +QHCF+LGAD +LEKP   D       PLRHFFDEWP +      WM LE     
Sbjct: 314 QQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPHEKNSKGSWMGLE----G 369

Query: 189 KTQLSISIP--------AMTSRYHNED 133
           +TQLS+SIP          TSRYHN++
Sbjct: 370 ETQLSMSIPMAANDLPITTTSRYHNDE 396


>ref|XP_002273821.2| PREDICTED: uncharacterized protein LOC100247998 [Vitis vinifera]
          Length = 381

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/74 (54%), Positives = 53/74 (71%), Gaps = 8/74 (10%)
 Frame = -3

Query: 360 KEESGKQHCFVLGADFKLEKPVKEDRE---KVPLRHFFDEWPQKSKESSPWMDLEE---- 202
           +E+  +QHCFVLG DFK  +P+K +R+   + PL HFF EWP K+++S  W+DLEE    
Sbjct: 293 QEQQEQQHCFVLGTDFKSSRPIKVERDGEAQKPLHHFFGEWPLKNRDS--WLDLEEDPPT 350

Query: 201 HSS-SKTQLSISIP 163
           H+S S TQLSISIP
Sbjct: 351 HASFSTTQLSISIP 364


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