BLASTX nr result

ID: Dioscorea21_contig00026423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026423
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002438588.1| hypothetical protein SORBIDRAFT_10g022360 [S...    69   4e-10
gb|AFW76493.1| hypothetical protein ZEAMMB73_178527 [Zea mays]         67   1e-09
ref|XP_003560651.1| PREDICTED: uncharacterized protein LOC100831...    61   8e-08

>ref|XP_002438588.1| hypothetical protein SORBIDRAFT_10g022360 [Sorghum bicolor]
           gi|241916811|gb|EER89955.1| hypothetical protein
           SORBIDRAFT_10g022360 [Sorghum bicolor]
          Length = 347

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/93 (48%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
 Frame = -1

Query: 348 SRCHLSLGNLGDDGSRVSFRVIGRNPVWVCARDDGDKA-------LFRNSETGELRAGDC 190
           SR H+SL  LG  G  V+F V+GRNPV V    DG          +FR  E GELRAGD 
Sbjct: 43  SRRHVSLRLLGVGGGGVAFEVVGRNPVVVVRSADGGDGGGSGTSRVFRRGEKGELRAGDA 102

Query: 189 FSLSLKDPKFIFVRTRE--GGDEVEERKRVLDA 97
            SLSLK P F  VR RE  G  + +    VLDA
Sbjct: 103 LSLSLKAPAFWAVRARERHGDADADVEPAVLDA 135


>gb|AFW76493.1| hypothetical protein ZEAMMB73_178527 [Zea mays]
          Length = 349

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 47/94 (50%), Positives = 55/94 (58%), Gaps = 10/94 (10%)
 Frame = -1

Query: 348 SRCHLSLGNLGDDGSRVSFRVIGRNPVWVCARD------DGDKALFRNSETGELRAGDCF 187
           SR H+SL  LG  G  ++F V+GRNPV V + D       G   +FR  E GELRAGD  
Sbjct: 47  SRRHVSLRLLGV-GDGIAFEVVGRNPVVVRSPDGGGGGGSGTSRVFRRGEKGELRAGDAL 105

Query: 186 SLSLKDPKFIFVRTREG-GD---EVEERKRVLDA 97
           SLSLK P F  VR REG GD   +V+    VLDA
Sbjct: 106 SLSLKAPAFWAVRAREGNGDGDADVDVEPAVLDA 139


>ref|XP_003560651.1| PREDICTED: uncharacterized protein LOC100831195 [Brachypodium
           distachyon]
          Length = 355

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/71 (54%), Positives = 45/71 (63%)
 Frame = -1

Query: 345 RCHLSLGNLGDDGSRVSFRVIGRNPVWVCARDDGDKALFRNSETGELRAGDCFSLSLKDP 166
           R H+SL  LG    RV+F V+GRNPV V +   GDK ++R  E GELR GD  SLSLK P
Sbjct: 46  RRHVSLRLLGGRDPRVAFEVVGRNPVAVRSAVGGDK-VYRCGEAGELREGDLLSLSLKAP 104

Query: 165 KFIFVRTREGG 133
            F  VR R GG
Sbjct: 105 LFWKVR-RTGG 114


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