BLASTX nr result

ID: Dioscorea21_contig00026405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026405
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...   122   3e-26
emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]   122   4e-26
emb|CBI40731.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein ho...   111   5e-23
ref|XP_004145601.1| PREDICTED: regulator of telomere elongation ...   111   5e-23

>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score =  122 bits (306), Expect = 3e-26
 Identities = 67/146 (45%), Positives = 93/146 (63%), Gaps = 2/146 (1%)
 Frame = -2

Query: 452  LNLCCSICKNSLGIADNNYLVPCSLAMSSKSFVAYILENGPTSTCFSQGLLQNHGRNIHV 273
            L + CS+C+N LG+ +N+  V CSL  SSK  +A +L     S      L  N   +I V
Sbjct: 1045 LQIFCSLCRNPLGLPENDLYVMCSLTSSSKVHLASLLRGSLES------LAVNTSTSIPV 1098

Query: 272  VITDVSSVNQRLFKRCVQGALDD-TWSEEDGCVFRILFCPFCVVSTPT-CLGLQIMAADS 99
            V++D SSVNQRL  + + GA +   W EEDGCVF  ++CPFC  STP  CLG+QIMA ++
Sbjct: 1099 VVSDSSSVNQRLCNKTLGGAQEHGVWCEEDGCVFNTIYCPFC--STPNNCLGVQIMATNA 1156

Query: 98   TNIHLLNKVMFYADFLDIKMEESKRE 21
            +N+ LLNK++FY D L+IK  E+  +
Sbjct: 1157 SNVDLLNKILFYFDRLEIKNPEASTD 1182


>emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
          Length = 1261

 Score =  122 bits (305), Expect = 4e-26
 Identities = 67/146 (45%), Positives = 93/146 (63%), Gaps = 2/146 (1%)
 Frame = -2

Query: 452  LNLCCSICKNSLGIADNNYLVPCSLAMSSKSFVAYILENGPTSTCFSQGLLQNHGRNIHV 273
            L + CS+C+N LG+ +N+  V CSL  SSK  +A +L     S      L  N   +I V
Sbjct: 1007 LQIFCSLCRNPLGLPENDLYVMCSLTSSSKVHLASLLRGSLES------LAVNTTTSIPV 1060

Query: 272  VITDVSSVNQRLFKRCVQGALDD-TWSEEDGCVFRILFCPFCVVSTPT-CLGLQIMAADS 99
            V++D SSVNQRL  + + GA +   W EEDGCVF  ++CPFC  STP  CLG+QIMA ++
Sbjct: 1061 VVSDSSSVNQRLCNKTLGGAQEHGVWCEEDGCVFNTIYCPFC--STPNNCLGVQIMATNA 1118

Query: 98   TNIHLLNKVMFYADFLDIKMEESKRE 21
            +N+ LLNK++FY D L+IK  E+  +
Sbjct: 1119 SNVELLNKILFYFDRLEIKNPEASTD 1144


>emb|CBI40731.3| unnamed protein product [Vitis vinifera]
          Length = 1218

 Score =  112 bits (279), Expect = 4e-23
 Identities = 62/136 (45%), Positives = 84/136 (61%), Gaps = 2/136 (1%)
 Frame = -2

Query: 452  LNLCCSICKNSLGIADNNYLVPCSLAMSSKSFVAYILENGPTSTCFSQGLLQNHGRNIHV 273
            L + CS+C+N LG+ +N+  V CSL  SSK  +A +L          + L  N   +I V
Sbjct: 1008 LQIFCSLCRNPLGLPENDLYVMCSLTSSSKVHLASLLRGS------LESLAVNTSTSIPV 1061

Query: 272  VITDVSSVNQRLFKRCVQGALD-DTWSEEDGCVFRILFCPFCVVSTP-TCLGLQIMAADS 99
            V++D SSVNQRL  + + GA +   W EEDGCVF  ++CPFC  STP  CLG+QIMA ++
Sbjct: 1062 VVSDSSSVNQRLCNKTLGGAQEHGVWCEEDGCVFNTIYCPFC--STPNNCLGVQIMATNA 1119

Query: 98   TNIHLLNKVMFYADFL 51
            +N+ LLNKV    D L
Sbjct: 1120 SNVDLLNKVWLSCDLL 1135


>ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis sativus]
          Length = 1239

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/137 (41%), Positives = 85/137 (62%)
 Frame = -2

Query: 452  LNLCCSICKNSLGIADNNYLVPCSLAMSSKSFVAYILENGPTSTCFSQGLLQNHGRNIHV 273
            L+L C++C++ LG  +N+  + CS  +SSK+ +  I E         +    N   +I +
Sbjct: 1051 LHLSCALCRSPLGRPENHLNITCSFTVSSKTHLISIYEER------FKAQTANSSASIQL 1104

Query: 272  VITDVSSVNQRLFKRCVQGALDDTWSEEDGCVFRILFCPFCVVSTPTCLGLQIMAADSTN 93
            +ITD+  VNQRL  R  + +    WSEEDGCV+  +FCPFC   +  C+G+QIMA D++N
Sbjct: 1105 IITDILFVNQRLLVRSSKNSGRGIWSEEDGCVYNYVFCPFCY--SDNCIGVQIMATDASN 1162

Query: 92   IHLLNKVMFYADFLDIK 42
            I LLNKVMF+ D L+I+
Sbjct: 1163 IPLLNKVMFFVDCLEIQ 1179


>ref|XP_004145601.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
            [Cucumis sativus]
          Length = 1027

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/137 (41%), Positives = 85/137 (62%)
 Frame = -2

Query: 452  LNLCCSICKNSLGIADNNYLVPCSLAMSSKSFVAYILENGPTSTCFSQGLLQNHGRNIHV 273
            L+L C++C++ LG  +N+  + CS  +SSK+ +  I E         +    N   +I +
Sbjct: 839  LHLSCALCRSPLGRPENHLNITCSFTVSSKTHLISIYEER------FKAQTANSSASIQL 892

Query: 272  VITDVSSVNQRLFKRCVQGALDDTWSEEDGCVFRILFCPFCVVSTPTCLGLQIMAADSTN 93
            +ITD+  VNQRL  R  + +    WSEEDGCV+  +FCPFC   +  C+G+QIMA D++N
Sbjct: 893  IITDILFVNQRLLVRSSKNSGRGIWSEEDGCVYNYVFCPFCY--SDNCIGVQIMATDASN 950

Query: 92   IHLLNKVMFYADFLDIK 42
            I LLNKVMF+ D L+I+
Sbjct: 951  IPLLNKVMFFVDCLEIQ 967


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