BLASTX nr result

ID: Dioscorea21_contig00026389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026389
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22115.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_002532083.1| pentatricopeptide repeat-containing protein,...    78   7e-13
ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containi...    78   9e-13
ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12

>emb|CBI22115.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/65 (58%), Positives = 49/65 (75%)
 Frame = -2

Query: 197 NRAIQHLAMASNLEIAYCCFKKLKDDTNYADQITTKTYNSLITLFLTKALPYKAFKICES 18
           N+ ++ LA A  LE+A+CCFKK++D      +I T TYNSLITLFL K LPYKAF++ ES
Sbjct: 166 NQVVRDLAKAEKLEVAFCCFKKVQDS---GCKIDTATYNSLITLFLNKGLPYKAFEVYES 222

Query: 17  MEASG 3
           MEA+G
Sbjct: 223 MEAAG 227


>ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Vitis vinifera]
          Length = 844

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/65 (58%), Positives = 49/65 (75%)
 Frame = -2

Query: 197 NRAIQHLAMASNLEIAYCCFKKLKDDTNYADQITTKTYNSLITLFLTKALPYKAFKICES 18
           N+ ++ LA A  LE+A+CCFKK++D      +I T TYNSLITLFL K LPYKAF++ ES
Sbjct: 253 NQVVRDLAKAEKLEVAFCCFKKVQDS---GCKIDTATYNSLITLFLNKGLPYKAFEVYES 309

Query: 17  MEASG 3
           MEA+G
Sbjct: 310 MEAAG 314


>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 841

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/64 (59%), Positives = 49/64 (76%)
 Frame = -2

Query: 197 NRAIQHLAMASNLEIAYCCFKKLKDDTNYADQITTKTYNSLITLFLTKALPYKAFKICES 18
           NR IQHLA A  LE+++CCFKK++D      +I T+TYN+LIT FL K LPYKAF+I ES
Sbjct: 257 NRVIQHLAKAEKLELSFCCFKKVQDS---GCKIDTQTYNALITSFLNKGLPYKAFEIYES 313

Query: 17  MEAS 6
           M+A+
Sbjct: 314 MQAA 317


>ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
           gi|449490234|ref|XP_004158545.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
          Length = 823

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/64 (59%), Positives = 48/64 (75%)
 Frame = -2

Query: 206 SSLNRAIQHLAMASNLEIAYCCFKKLKDDTNYADQITTKTYNSLITLFLTKALPYKAFKI 27
           S+ NR IQ+LA A  LE+++CCFKK+ D      ++ T+TYNSLITLFL K LPYKAF+I
Sbjct: 231 SAYNRVIQYLAKAEKLEVSFCCFKKIHDS---GFKVDTQTYNSLITLFLNKGLPYKAFEI 287

Query: 26  CESM 15
            ESM
Sbjct: 288 YESM 291


>ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Glycine max]
          Length = 752

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/68 (54%), Positives = 51/68 (75%)
 Frame = -2

Query: 206 SSLNRAIQHLAMASNLEIAYCCFKKLKDDTNYADQITTKTYNSLITLFLTKALPYKAFKI 27
           ++ NR I++LA A  LE+++CCFKK+    N   ++ T+TYNSLITLFL K LPYKAF++
Sbjct: 160 AACNRVIRYLAKAEKLEVSFCCFKKI---LNAGCKVDTETYNSLITLFLNKGLPYKAFEM 216

Query: 26  CESMEASG 3
            ESME +G
Sbjct: 217 YESMEKAG 224


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