BLASTX nr result
ID: Dioscorea21_contig00026346
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00026346
(915 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g... 361 1e-97
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi... 361 1e-97
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group] 359 6e-97
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]... 357 2e-96
gb|ABB47537.2| retrotransposon protein, putative, unclassified [... 356 5e-96
>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1427
Score = 361 bits (927), Expect = 1e-97
Identities = 171/309 (55%), Positives = 232/309 (75%), Gaps = 4/309 (1%)
Frame = +1
Query: 1 KCFNCNKLGHYASEC-WSERREEEANLV--GDEEPALLMTVSQKERKKDVVMLSEKEVIP 171
KC+NC + GHY+++C ++++ EA+L D PALL+ V++ E +V+ E+ V P
Sbjct: 288 KCYNCEEFGHYSTQCPHPKKKKVEAHLAQTDDANPALLLAVTEDEPASGLVV-HEERVWP 346
Query: 172 ELDNIVKGQLYTDIWYLDNGASNHMTGHRAKFQRLDESITGMVKFGDGSAVEIMGRGTVL 351
+L G DIW+LDNGASNHMTG RAKF+ LD SITG VKFGD S V+I G+G++L
Sbjct: 347 QLLLADSGAATGDIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSIL 406
Query: 352 LLCKNGDHRVLPEVYYIPRLRSNIISLGQMTEDGNEVEMAGELLKIYDANGT-LLMSVSR 528
CKNGD +L +V+YIP L N++SLGQ+TE G+ V M ++L+++D + L+M V R
Sbjct: 407 FSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRR 466
Query: 529 SPNRLYKIQLETCKPACLISIFDDPTWLWHSRLGHINFHALKMMGEKQMALGLPVITHPN 708
+PNRLY+I+L+ P CL++ D+P WLWH+RLGH+NF A+K++ +K MA G+P ITHPN
Sbjct: 467 TPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPN 526
Query: 709 KVCEGCLVAKQARNPFPAQANFRAEEPLELLHIDLCGPITPCTAAGNKYFLLIVDDCTRW 888
++C+ CLVAKQ R PFPA ANFRAEEPLELLHIDLCGPITP T AGN+YF+LIVDD +RW
Sbjct: 527 QLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRW 586
Query: 889 MWVYFVKSK 915
MW++ +K+K
Sbjct: 587 MWMFVIKTK 595
>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
Length = 1427
Score = 361 bits (927), Expect = 1e-97
Identities = 171/309 (55%), Positives = 232/309 (75%), Gaps = 4/309 (1%)
Frame = +1
Query: 1 KCFNCNKLGHYASEC-WSERREEEANLV--GDEEPALLMTVSQKERKKDVVMLSEKEVIP 171
KC+NC + GHY+++C ++++ EA+L D PALL+ V++ E +V+ E+ V P
Sbjct: 288 KCYNCEEFGHYSTQCPHPKKKKVEAHLAQTDDANPALLLAVTEDEPASGLVV-HEERVWP 346
Query: 172 ELDNIVKGQLYTDIWYLDNGASNHMTGHRAKFQRLDESITGMVKFGDGSAVEIMGRGTVL 351
+L G DIW+LDNGASNHMTG RAKF+ LD SITG VKFGD S V+I G+G++L
Sbjct: 347 QLLLADSGAATGDIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSIL 406
Query: 352 LLCKNGDHRVLPEVYYIPRLRSNIISLGQMTEDGNEVEMAGELLKIYDANGT-LLMSVSR 528
CKNGD +L +V+YIP L N++SLGQ+TE G+ V M ++L+++D + L+M V R
Sbjct: 407 FSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRR 466
Query: 529 SPNRLYKIQLETCKPACLISIFDDPTWLWHSRLGHINFHALKMMGEKQMALGLPVITHPN 708
+PNRLY+I+L+ P CL++ D+P WLWH+RLGH+NF A+K++ +K MA G+P ITHPN
Sbjct: 467 TPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPN 526
Query: 709 KVCEGCLVAKQARNPFPAQANFRAEEPLELLHIDLCGPITPCTAAGNKYFLLIVDDCTRW 888
++C+ CLVAKQ R PFPA ANFRAEEPLELLHIDLCGPITP T AGN+YF+LIVDD +RW
Sbjct: 527 QLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRW 586
Query: 889 MWVYFVKSK 915
MW++ +K+K
Sbjct: 587 MWMFVIKTK 595
>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
Length = 893
Score = 359 bits (921), Expect = 6e-97
Identities = 167/315 (53%), Positives = 231/315 (73%), Gaps = 10/315 (3%)
Frame = +1
Query: 1 KCFNCNKLGHYASEC-WSERREEEANLVGDEE--PALLMTVSQKERKKDV------VMLS 153
KCFNC + GHY+++C ++++ EA+L E+ PALL+ V++ + +++
Sbjct: 94 KCFNCEEFGHYSTQCPHPKKKKAEAHLAQTEDAGPALLLAVTEAVQNAPCQDALCGLVVH 153
Query: 154 EKEVIPELDNIVKGQLYTDIWYLDNGASNHMTGHRAKFQRLDESITGMVKFGDGSAVEIM 333
E+ V P L KG D+WYLDNGASNHM+G R KF+ LDE++TG V+FGD S+V+IM
Sbjct: 154 EERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDRRKFRELDETVTGQVRFGDASSVQIM 213
Query: 334 GRGTVLLLCKNGDHRVLPEVYYIPRLRSNIISLGQMTEDGNEVEMAGELLKIYDANG-TL 510
G+G++L CKNGD +L +VYYIP L N++SLGQ+TE G+ V M G+ L+++D N L
Sbjct: 214 GQGSILFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRL 273
Query: 511 LMSVSRSPNRLYKIQLETCKPACLISIFDDPTWLWHSRLGHINFHALKMMGEKQMALGLP 690
+M V R+ NRLY+I+L+ P CL++ DDP WLWH+RLGH+NFHALK++ +K+M G+P
Sbjct: 274 VMKVRRTSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMVAGVP 333
Query: 691 VITHPNKVCEGCLVAKQARNPFPAQANFRAEEPLELLHIDLCGPITPCTAAGNKYFLLIV 870
+ HPN++C+ CLVAKQ R FP AN+RAE PLELLH+DLCGPITP T AGN+YF+LIV
Sbjct: 334 AVHHPNQLCQACLVAKQVRQSFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFMLIV 393
Query: 871 DDCTRWMWVYFVKSK 915
DD +RWMWV+ +KSK
Sbjct: 394 DDFSRWMWVFVIKSK 408
>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108710383|gb|ABF98178.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1339
Score = 357 bits (917), Expect = 2e-96
Identities = 167/315 (53%), Positives = 230/315 (73%), Gaps = 10/315 (3%)
Frame = +1
Query: 1 KCFNCNKLGHYASEC-WSERREEEANLVGDEE--PALLMTVS---QKERKKDVV---MLS 153
KCFNC + GHY+++C ++++ EA+L E+ P LL+ V+ Q ++D + ++
Sbjct: 234 KCFNCEEFGHYSTQCPHPKKKKAEAHLAQTEDAGPTLLLAVTEAVQNASRQDALCGLVVH 293
Query: 154 EKEVIPELDNIVKGQLYTDIWYLDNGASNHMTGHRAKFQRLDESITGMVKFGDGSAVEIM 333
E+ V P L KG D+WYLDNGASNHM+G KF+ LDE++TG V+FGD S+V+IM
Sbjct: 294 EERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDHRKFRELDETVTGQVRFGDASSVQIM 353
Query: 334 GRGTVLLLCKNGDHRVLPEVYYIPRLRSNIISLGQMTEDGNEVEMAGELLKIYDANG-TL 510
G+G++L CKNGD +L +VYYIP L N++SLGQ+TE G+ V M G+ L+++D N L
Sbjct: 354 GKGSILFSCKNGDQWLLDDVYYIPSLYCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRL 413
Query: 511 LMSVSRSPNRLYKIQLETCKPACLISIFDDPTWLWHSRLGHINFHALKMMGEKQMALGLP 690
+M V RS NRLY+I+L+ P CL++ DDP WLWH+RLGH+NFHALK++ +K+MA G+P
Sbjct: 414 VMKVRRSSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMAAGVP 473
Query: 691 VITHPNKVCEGCLVAKQARNPFPAQANFRAEEPLELLHIDLCGPITPCTAAGNKYFLLIV 870
+ HPN++C+ CLVAKQ R PFP AN+ AE PLELLH+DLCGPITP T GN+YF+LIV
Sbjct: 474 AVHHPNQLCQACLVAKQVRQPFPGMANYLAEAPLELLHMDLCGPITPSTFTGNRYFMLIV 533
Query: 871 DDCTRWMWVYFVKSK 915
DD + WMWV+ +KSK
Sbjct: 534 DDFSHWMWVFVIKSK 548
>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1172
Score = 356 bits (913), Expect = 5e-96
Identities = 168/315 (53%), Positives = 232/315 (73%), Gaps = 10/315 (3%)
Frame = +1
Query: 1 KCFNCNKLGHYASEC-WSERREEEANLVGDEE--PALLMTVS---QKERKKDV---VMLS 153
KCFNC + GHY+++C ++++ EA+LV E+ PALL+ V+ Q ++D +++
Sbjct: 128 KCFNCEEFGHYSTQCPHPKKKKAEAHLVQTEDAGPALLLAVTEAVQNAPRQDAHCGLVVH 187
Query: 154 EKEVIPELDNIVKGQLYTDIWYLDNGASNHMTGHRAKFQRLDESITGMVKFGDGSAVEIM 333
E+ V P L KG D+WYLDNGASNHM+G R KF+ LDE++TG V+FGD S+V+IM
Sbjct: 188 EERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDRRKFRELDETMTGQVRFGDASSVQIM 247
Query: 334 GRGTVLLLCKNGDHRVLPEVYYIPRLRSNIISLGQMTEDGNEVEMAGELLKIYDANG-TL 510
G G++L CKNGD +L +VYYIP L N++SLGQ+TE G+ V M G+ LK++D N L
Sbjct: 248 GMGSILFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVMMDGDDLKVFDKNPWRL 307
Query: 511 LMSVSRSPNRLYKIQLETCKPACLISIFDDPTWLWHSRLGHINFHALKMMGEKQMALGLP 690
+M V R+ NRLY+I+L+ CL++ D+P WLWH+R+GH+NFHALK++ +K+MA G+P
Sbjct: 308 VMKVRRTSNRLYRIELQLASQVCLLASLDNPAWLWHARIGHVNFHALKLLVDKEMASGVP 367
Query: 691 VITHPNKVCEGCLVAKQARNPFPAQANFRAEEPLELLHIDLCGPITPCTAAGNKYFLLIV 870
+ HPN++C+ CLVAKQ R PFP AN+RAE PLELLH+DLCGPITP T AGN+YF+LIV
Sbjct: 368 TVHHPNQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFMLIV 427
Query: 871 DDCTRWMWVYFVKSK 915
DD + WMWV+ +K K
Sbjct: 428 DDFSNWMWVFVIKLK 442