BLASTX nr result

ID: Dioscorea21_contig00026343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026343
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314189.1| f-box family protein [Populus trichocarpa] g...   104   7e-21
emb|CBI31672.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [V...   103   1e-20
emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]   103   1e-20
ref|XP_003539681.1| PREDICTED: dof zinc finger protein DOF3.6-li...   102   2e-20

>ref|XP_002314189.1| f-box family protein [Populus trichocarpa]
           gi|222850597|gb|EEE88144.1| f-box family protein
           [Populus trichocarpa]
          Length = 326

 Score =  104 bits (260), Expect = 7e-21
 Identities = 48/68 (70%), Positives = 55/68 (80%)
 Frame = -2

Query: 206 LPPGVVQPPRNDHAGVSPTIRPNSMAERARLAKIPQPETSPKCPRCDSANTKFCYFNNYS 27
           LPP +  PP    +G + +IRP SM++RARLAKIPQPE + KCPRCDS NTKFCYFNNYS
Sbjct: 34  LPP-LPPPPHVGGSGTAGSIRPGSMSDRARLAKIPQPEAALKCPRCDSTNTKFCYFNNYS 92

Query: 26  LSQPRHFC 3
           LSQPRHFC
Sbjct: 93  LSQPRHFC 100


>emb|CBI31672.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/72 (68%), Positives = 55/72 (76%), Gaps = 4/72 (5%)
 Frame = -2

Query: 206 LPPGVVQPPR----NDHAGVSPTIRPNSMAERARLAKIPQPETSPKCPRCDSANTKFCYF 39
           LPP    PP        +G + TIRP SMA+RARLAK+PQPET+ KCPRC+S NTKFCYF
Sbjct: 32  LPPQQAPPPLPPVGGGGSGGTGTIRPGSMADRARLAKLPQPETALKCPRCESTNTKFCYF 91

Query: 38  NNYSLSQPRHFC 3
           NNYSLSQPRHFC
Sbjct: 92  NNYSLSQPRHFC 103


>ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [Vitis vinifera]
          Length = 338

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/72 (68%), Positives = 55/72 (76%), Gaps = 4/72 (5%)
 Frame = -2

Query: 206 LPPGVVQPPR----NDHAGVSPTIRPNSMAERARLAKIPQPETSPKCPRCDSANTKFCYF 39
           LPP    PP        +G + TIRP SMA+RARLAK+PQPET+ KCPRC+S NTKFCYF
Sbjct: 32  LPPQQAPPPLPPVGGGGSGGTGTIRPGSMADRARLAKLPQPETALKCPRCESTNTKFCYF 91

Query: 38  NNYSLSQPRHFC 3
           NNYSLSQPRHFC
Sbjct: 92  NNYSLSQPRHFC 103


>emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]
          Length = 338

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/72 (68%), Positives = 55/72 (76%), Gaps = 4/72 (5%)
 Frame = -2

Query: 206 LPPGVVQPPR----NDHAGVSPTIRPNSMAERARLAKIPQPETSPKCPRCDSANTKFCYF 39
           LPP    PP        +G + TIRP SMA+RARLAK+PQPET+ KCPRC+S NTKFCYF
Sbjct: 32  LPPQQAPPPLPPVGGGGSGGTGTIRPGSMADRARLAKLPQPETALKCPRCESTNTKFCYF 91

Query: 38  NNYSLSQPRHFC 3
           NNYSLSQPRHFC
Sbjct: 92  NNYSLSQPRHFC 103


>ref|XP_003539681.1| PREDICTED: dof zinc finger protein DOF3.6-like [Glycine max]
          Length = 307

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/69 (72%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
 Frame = -2

Query: 206 LPPGVVQPPRNDHAGVSP-TIRPNSMAERARLAKIPQPETSPKCPRCDSANTKFCYFNNY 30
           LPP    PP   H G S  +IRP SMA+RARLAKIP PE + KCPRCDS NTKFCYFNNY
Sbjct: 35  LPP---LPPHQPHVGGSVGSIRPGSMADRARLAKIPPPEAALKCPRCDSTNTKFCYFNNY 91

Query: 29  SLSQPRHFC 3
           SLSQPRHFC
Sbjct: 92  SLSQPRHFC 100


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