BLASTX nr result
ID: Dioscorea21_contig00026319
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00026319
(706 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003572701.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l... 103 1e-27
ref|XP_003575325.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l... 104 4e-26
dbj|BAK06951.1| predicted protein [Hordeum vulgare subsp. vulgare] 103 1e-25
gb|AFW72248.1| FAR1-domain family sequence [Zea mays] 95 2e-25
gb|AFW72247.1| FAR1-domain family sequence [Zea mays] 95 2e-25
>ref|XP_003572701.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Brachypodium
distachyon]
Length = 847
Score = 103 bits (257), Expect(2) = 1e-27
Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 10/182 (5%)
Frame = +1
Query: 133 LKALVHCVSAIVRADAPVYIFQVKEHLRSKDDKTMEQKIYEVL-YNVTNLDVLCICSSFQ 309
LKA ++C D F VKE +D K E + YEVL + L V C C F+
Sbjct: 529 LKATMYCDGMETSVDGSFVTFNVKECSYMEDGKETESRTYEVLCWKEEELIVQCECGFFE 588
Query: 310 SRGILCRHALSALSFQDVVEIPSKYLLERWRKDFKRMRALTFHSD*C*WPN--------- 462
GILCRHALS L Q++ EIP +Y+L+RW++D+K++ AL+ +PN
Sbjct: 589 FTGILCRHALSVLKLQELFEIPQRYVLDRWKRDYKKLHALSH------YPNEMLLGGAVE 642
Query: 463 RTP*KFL*ACLKLAEIGLIFEVKYEFALKVVNEAMQKVLTDDTVCKDSESKVVPLEGMVN 642
R F C +L +G I E +Y ALK++ EA + +L DD ++ +S ++ E
Sbjct: 643 RHDYMFT-QCRQLLNLGFISESRYLVALKLLREAEKALLEDDLSARERQSTLLSFEAEAP 701
Query: 643 HN 648
N
Sbjct: 702 EN 703
Score = 45.4 bits (106), Expect(2) = 1e-27
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 6 EKEFNADADSVCKSPLLLTQLCLEEQASKIYTAGIFRKFQVEFK 137
+KE AD +S ++PL +T+ +EEQ +K YT +FRKFQ E K
Sbjct: 487 KKELQADEESSHRTPLTVTKFYMEEQLAKAYTISMFRKFQDELK 530
>ref|XP_003575325.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Brachypodium
distachyon]
Length = 811
Score = 104 bits (260), Expect(2) = 4e-26
Identities = 59/165 (35%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
Frame = +1
Query: 133 LKALVHCVSAIVRADAPVYIFQVKEHLRSKDDKTMEQKIYEVLYNVTNLDVLCICSSFQS 312
++A+++C + V D P+ F VKE + +D K KI+ V Y D+ CIC FQ
Sbjct: 504 IEAIMYCHVSFVGIDGPISTFNVKECIFLEDGKRTMSKIFAVTYTTEEEDITCICGGFQF 563
Query: 313 RGILCRHALSALSFQDVVEIPSKYLLERWRKDFKRMRALTFHSD*C*WPNRTP*KF---L 483
GILCRH+LS L FQ V EIPS+Y+L+RW KDF+++ + S PN ++
Sbjct: 564 SGILCRHSLSVLKFQQVHEIPSQYVLDRWNKDFRQLHVMGRPSSDV-VPNNRADRYDYLS 622
Query: 484 *ACLKLAEIGLIFEVKYEFALKVVNEAMQKVLTDDTVCKDSESKV 618
CL+L + ++ + KY AL++V E ++K L + D++ ++
Sbjct: 623 MRCLQLVDSAVLSD-KYRLALRLVRE-VEKFLLNSNTHDDTQPRI 665
Score = 39.7 bits (91), Expect(2) = 4e-26
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +3
Query: 6 EKEFNADADSVCKSPLLLTQLCLEEQASKIYTAGIFRKFQVEFKGI 143
EKE AD ++ K +++ +EEQ SK+YT IF+KFQ E + I
Sbjct: 462 EKEAQADFETFHKQRPPVSKFYMEEQLSKVYTHNIFKKFQDEIEAI 507
>dbj|BAK06951.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 813
Score = 103 bits (258), Expect(2) = 1e-25
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Frame = +1
Query: 133 LKALVHCVSAIVRADAPVYIFQVKEHLRSKDDKTMEQKIYEVLYNVTNLDVLCICSSFQS 312
++A+++C +++ D P+ + VKE + +D K KI+ V YN D+ CIC FQ
Sbjct: 504 IEAIMYCHVSLMNGDGPISTYNVKECIFLEDGKRTMSKIFAVTYNTEEKDITCICGGFQF 563
Query: 313 RGILCRHALSALSFQDVVEIPSKYLLERWRKDFKRMRALTFHSD*C*WPNRTP--*KFL* 486
GILCRH+LS L FQ V EIPS+Y+L+RW+KDF+++ + S NR
Sbjct: 564 SGILCRHSLSVLKFQQVREIPSQYVLDRWKKDFRQLHVMGRLSSDIVPDNRVDRYDYLSM 623
Query: 487 ACLKLAEIGLIFEVKYEFALKVVNEAMQKVLTDDTVCKDSESKV------VPLEGMVNHN 648
CL+L + ++ + K AL++V E ++K L D++ ++ V + N
Sbjct: 624 RCLQLVDSAVLSD-KCRLALRLVRE-VEKFLLSSNTHDDTQPRIKSRIPKVKPNTVTGQN 681
Query: 649 VIDMTINDG 675
++++ ++G
Sbjct: 682 LVNLVTDNG 690
Score = 38.5 bits (88), Expect(2) = 1e-25
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 6 EKEFNADADSVCKSPLLLTQLCLEEQASKIYTAGIFRKFQVEFKGI 143
EKE AD ++ K +++ +EEQ SK+YT +F+KFQ E + I
Sbjct: 462 EKEAQADFETFHKQRPPVSKFYMEEQLSKVYTHNMFKKFQDEIEAI 507
>gb|AFW72248.1| FAR1-domain family sequence [Zea mays]
Length = 883
Score = 94.7 bits (234), Expect(2) = 2e-25
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Frame = +1
Query: 133 LKALVHCVSAIVRADAPVYIFQVKEHLRSKDDKTMEQKIYEVLY--NVTNLDVLCICSSF 306
LKA ++C ++ D + F+VKE +D K E + YEV + +++ C C
Sbjct: 557 LKATMYCDGMPIKVDGRLVTFEVKECSYMEDGKDTESRTYEVYFCKEEPKVEIECECGFV 616
Query: 307 QSRGILCRHALSALSFQDVVEIPSKYLLERWRKDFKRMRALTFHSD*C*WPNRTP*K--- 477
Q GILCRHALS L Q++ EIP Y+L+RWR+D+K+ L +++ PN P
Sbjct: 617 QFTGILCRHALSVLKLQEIFEIPKDYVLDRWRRDYKK---LYYNAK---KPNEMPLSDIV 670
Query: 478 -----FL*ACLKLAEIGLIFEVKYEFALKVVNEAMQKVLTDDTVCKDSESKVVPLEGMVN 642
C +L +G + E +Y ALK++ E + +L D +D + ++ E
Sbjct: 671 ERSDYLFTQCSQLLNLGFVSESRYLVALKLLREMERSLLDDGLPARDRQPMLLSFEADAP 730
Query: 643 HN 648
N
Sbjct: 731 EN 732
Score = 47.0 bits (110), Expect(2) = 2e-25
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +3
Query: 6 EKEFNADADSVCKSPLLLTQLCLEEQASKIYTAGIFRKFQVEFK 137
+KE+ AD +S +SPL +T+ +EEQ +K YT +FRKFQ E K
Sbjct: 515 KKEWQADEESSHRSPLTVTKFYMEEQLAKAYTINMFRKFQDELK 558
>gb|AFW72247.1| FAR1-domain family sequence [Zea mays]
Length = 879
Score = 94.7 bits (234), Expect(2) = 2e-25
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Frame = +1
Query: 133 LKALVHCVSAIVRADAPVYIFQVKEHLRSKDDKTMEQKIYEVLY--NVTNLDVLCICSSF 306
LKA ++C ++ D + F+VKE +D K E + YEV + +++ C C
Sbjct: 552 LKATMYCDGMPIKVDGRLVTFEVKECSYMEDGKDTESRTYEVYFCKEEPKVEIECECGFV 611
Query: 307 QSRGILCRHALSALSFQDVVEIPSKYLLERWRKDFKRMRALTFHSD*C*WPNRTP*K--- 477
Q GILCRHALS L Q++ EIP Y+L+RWR+D+K+ L +++ PN P
Sbjct: 612 QFTGILCRHALSVLKLQEIFEIPKDYVLDRWRRDYKK---LYYNAK---KPNEMPLSDIV 665
Query: 478 -----FL*ACLKLAEIGLIFEVKYEFALKVVNEAMQKVLTDDTVCKDSESKVVPLEGMVN 642
C +L +G + E +Y ALK++ E + +L D +D + ++ E
Sbjct: 666 ERSDYLFTQCSQLLNLGFVSESRYLVALKLLREMERSLLDDGLPARDRQPMLLSFEADAP 725
Query: 643 HN 648
N
Sbjct: 726 EN 727
Score = 47.0 bits (110), Expect(2) = 2e-25
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +3
Query: 6 EKEFNADADSVCKSPLLLTQLCLEEQASKIYTAGIFRKFQVEFK 137
+KE+ AD +S +SPL +T+ +EEQ +K YT +FRKFQ E K
Sbjct: 510 KKEWQADEESSHRSPLTVTKFYMEEQLAKAYTINMFRKFQDELK 553