BLASTX nr result

ID: Dioscorea21_contig00026312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026312
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   162   8e-38
emb|CBI30725.3| unnamed protein product [Vitis vinifera]              152   5e-35
ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   144   1e-32
ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809...   144   2e-32
ref|XP_004155535.1| PREDICTED: uncharacterized protein LOC101226...   143   3e-32

>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  162 bits (409), Expect = 8e-38
 Identities = 89/174 (51%), Positives = 127/174 (72%), Gaps = 10/174 (5%)
 Frame = -3

Query: 634  TTQTKVLYSDSLEMRNGEVIK--------NSHAKVINNIPELNRKELESGWLEEASSSHR 479
            + Q ++L ++SLEM   E+++         S+  V NN+ + ++  LES W  EASSSHR
Sbjct: 990  SAQGQLLNANSLEMGRSEIVEILPSPRELKSNDHVDNNV-QSDKTGLESSWAGEASSSHR 1048

Query: 478  RGSLDHSQSERRESGEPQR-QSMVRSRVSLAHVIQNADGYAQ-GGWSRQKAVSIAEKLEQ 305
            + ++  S  ERR+ GE    QS+VRS+VSLAHVIQ A+G +Q  GW+++KAVSIAEKLEQ
Sbjct: 1049 KSTMA-SVPERRKFGEQSHSQSLVRSKVSLAHVIQQAEGCSQRSGWTKRKAVSIAEKLEQ 1107

Query: 304  ENLRLESRYKNMLCWRVTRIPRRKLRQWRVKKRKPHSLLKLVTCGKCLSVKSNR 143
            ENLRLE R +++LCW+ +++ RRKL +++++ R+PHSLLKLV+CGKCLS KS R
Sbjct: 1108 ENLRLEPRSRSLLCWKASKVTRRKLSRFKIRTRRPHSLLKLVSCGKCLSSKSPR 1161


>emb|CBI30725.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  152 bits (385), Expect = 5e-35
 Identities = 84/161 (52%), Positives = 118/161 (73%), Gaps = 2/161 (1%)
 Frame = -3

Query: 619  VLYSDSLEMRNGEVIKNSHAKVINNIPELNRKELESGWLEEASSSHRRGSLDHSQSERRE 440
            +L ++SLEM   E+++     ++ +  ELN       W  EASSSHR+ ++  S  ERR+
Sbjct: 771  LLNANSLEMGRSEIVE-----ILPSPRELN------SWAGEASSSHRKSTMA-SVPERRK 818

Query: 439  SGEPQR-QSMVRSRVSLAHVIQNADGYAQ-GGWSRQKAVSIAEKLEQENLRLESRYKNML 266
             GE    QS+VRS+VSLAHVIQ A+G +Q  GW+++KAVSIAEKLEQENLRLE R +++L
Sbjct: 819  FGEQSHSQSLVRSKVSLAHVIQQAEGCSQRSGWTKRKAVSIAEKLEQENLRLEPRSRSLL 878

Query: 265  CWRVTRIPRRKLRQWRVKKRKPHSLLKLVTCGKCLSVKSNR 143
            CW+ +++ RRKL +++++ R+PHSLLKLV+CGKCLS KS R
Sbjct: 879  CWKASKVTRRKLSRFKIRTRRPHSLLKLVSCGKCLSSKSPR 919


>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223538517|gb|EEF40122.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1105

 Score =  144 bits (364), Expect = 1e-32
 Identities = 81/149 (54%), Positives = 110/149 (73%), Gaps = 2/149 (1%)
 Frame = -3

Query: 583  EVIKNSHAKVINNIPELNRKELESGWLEEASSSHRRGSLDHSQSERRESGEP-QRQSMVR 407
            E+  + HA   +N  E +++ L+     E S SH+  S+  S SERR+ GEP Q +S+VR
Sbjct: 962  EIKGSGHA---DNDAESSKRALQRARAGE-SVSHKNSSIG-SMSERRKLGEPSQSKSLVR 1016

Query: 406  SRVSLAHVIQNADGYAQG-GWSRQKAVSIAEKLEQENLRLESRYKNMLCWRVTRIPRRKL 230
            S+VSLAHVIQ A+G  Q  GWS++KAVSIAEKLEQENLRLE R +++LCW+ +R+ RRKL
Sbjct: 1017 SKVSLAHVIQQAEGCTQQTGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRVTRRKL 1076

Query: 229  RQWRVKKRKPHSLLKLVTCGKCLSVKSNR 143
             + +++ RKPH+LLKLV+CGKC+S KS R
Sbjct: 1077 SRLKIRTRKPHALLKLVSCGKCISSKSPR 1105


>ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809005 [Glycine max]
          Length = 1101

 Score =  144 bits (363), Expect = 2e-32
 Identities = 76/177 (42%), Positives = 123/177 (69%), Gaps = 7/177 (3%)
 Frame = -3

Query: 652  KLSKESTTQTKVLYSDSLEMRNGEVIKNSHAKV--INNIPELNR-----KELESGWLEEA 494
            +L+K++ +  +   +DS+E R GE+++ + ++V  +N+  +++      K LE   + ++
Sbjct: 926  ELNKDAASAVQQPLTDSVEKRRGEIVEEAASQVEHMNSEQQVDAHGTSYKSLEGTSIGQS 985

Query: 493  SSSHRRGSLDHSQSERRESGEPQRQSMVRSRVSLAHVIQNADGYAQGGWSRQKAVSIAEK 314
            S+S +   +     ER+   + Q +S+VRS+VSLAHVIQ A+G  + GWS++KAVSIAEK
Sbjct: 986  SASQKMPIVKSHLDERKLMEQGQSRSLVRSKVSLAHVIQQAEGQ-RSGWSKRKAVSIAEK 1044

Query: 313  LEQENLRLESRYKNMLCWRVTRIPRRKLRQWRVKKRKPHSLLKLVTCGKCLSVKSNR 143
            LEQENLRLE R ++++CW+ +R+ RRKL + +++ RKP +LL LV+CGKCLS KS R
Sbjct: 1045 LEQENLRLEPRSRSLICWKASRVTRRKLSRLKIRSRKPRALLNLVSCGKCLSTKSPR 1101


>ref|XP_004155535.1| PREDICTED: uncharacterized protein LOC101226355 [Cucumis sativus]
          Length = 1120

 Score =  143 bits (361), Expect = 3e-32
 Identities = 82/161 (50%), Positives = 115/161 (71%), Gaps = 3/161 (1%)
 Frame = -3

Query: 631  TQTKVLYSDSLEMRNGEVIK-NSHAKVINNIPELNRKELESGWLEEASSSHRRGSLDHSQ 455
            +Q ++ +  S E+  GE+++ ++  +  NN  E N++ LE    E + S  R+ S   S 
Sbjct: 961  SQAQLTHYGSGEVGRGEIVEIDASPREANNQREPNQRNLEGSQGEVSVS--RKNSTMSSI 1018

Query: 454  SERRESGEPQR-QSMVRSRVSLAHVIQNADGYAQ-GGWSRQKAVSIAEKLEQENLRLESR 281
            SERRE+G   R QS+VRS+VSLAHVIQ A+G +Q  GWS +KAVSIAEKLEQENLRLE +
Sbjct: 1019 SERREAGAQSRSQSIVRSKVSLAHVIQQAEGCSQRSGWSTRKAVSIAEKLEQENLRLEPQ 1078

Query: 280  YKNMLCWRVTRIPRRKLRQWRVKKRKPHSLLKLVTCGKCLS 158
             +++LCW+ +R+ RRKL + +V+ R+P SLLKLV+CGKCLS
Sbjct: 1079 SRSLLCWKASRVTRRKLSRLKVRTRRPQSLLKLVSCGKCLS 1119


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