BLASTX nr result

ID: Dioscorea21_contig00026298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026298
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   195   4e-48
ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-l...   191   4e-47
ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-l...   191   7e-47
dbj|BAD53235.1| putative WDR13 protein [Oryza sativa Japonica Gr...   189   3e-46
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46

>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score =  195 bits (495), Expect = 4e-48
 Identities = 91/115 (79%), Positives = 106/115 (92%)
 Frame = +1

Query: 1   QYIASSSMDKTVRVWDASQGHCIRVIYGVSSQLCIRFHPVNNNLLFVGNANKEISVMNFS 180
           QYIASSSMDK+VRVW+ S+G CIRVIYG+SSQLCIRFHPVNNN L  GNAN+EI+V NFS
Sbjct: 223 QYIASSSMDKSVRVWEISKGLCIRVIYGISSQLCIRFHPVNNNFLSAGNANREITVFNFS 282

Query: 181 TGRVINKAVFENEITAMDNDHTGQLIFSGDAQGCIYTVSVNSHTGSISRSHRNRN 345
           TGRVINKAVF++ +TA+D+DHTGQLIF GDAQGCIYTV++NS TGS+SRSHRNR+
Sbjct: 283 TGRVINKAVFDDAVTAVDHDHTGQLIFCGDAQGCIYTVNMNSRTGSLSRSHRNRS 337


>ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 514

 Score =  191 bits (486), Expect = 4e-47
 Identities = 88/115 (76%), Positives = 105/115 (91%)
 Frame = +1

Query: 1   QYIASSSMDKTVRVWDASQGHCIRVIYGVSSQLCIRFHPVNNNLLFVGNANKEISVMNFS 180
           QYIASSS+DKTVRVW+  +G CIRVIYGVSSQLCIRFHPVNNN L VGNANKEI+V NFS
Sbjct: 255 QYIASSSLDKTVRVWEIGKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFS 314

Query: 181 TGRVINKAVFENEITAMDNDHTGQLIFSGDAQGCIYTVSVNSHTGSISRSHRNRN 345
           TGRVINK++F++E+T+MD+DHTG L+F GDAQGCIY+V++NSHTG +SRSHR R+
Sbjct: 315 TGRVINKSIFDSEVTSMDHDHTGNLLFCGDAQGCIYSVNMNSHTGVLSRSHRYRS 369


>ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 553

 Score =  191 bits (484), Expect = 7e-47
 Identities = 87/115 (75%), Positives = 106/115 (92%)
 Frame = +1

Query: 1   QYIASSSMDKTVRVWDASQGHCIRVIYGVSSQLCIRFHPVNNNLLFVGNANKEISVMNFS 180
           QYIASSS+DKTVRVW+ ++G CIRVIYGVSSQLCIRFHPVNNN L VGNANKEI+V NFS
Sbjct: 247 QYIASSSLDKTVRVWEIAKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEINVFNFS 306

Query: 181 TGRVINKAVFENEITAMDNDHTGQLIFSGDAQGCIYTVSVNSHTGSISRSHRNRN 345
           TGRVIN+++F++E+T+MD+DHTG L+F GDAQGCIY+V++NSHTG +SRSHR R+
Sbjct: 307 TGRVINRSIFDSEVTSMDHDHTGHLLFCGDAQGCIYSVNMNSHTGVLSRSHRYRS 361


>dbj|BAD53235.1| putative WDR13 protein [Oryza sativa Japonica Group]
          Length = 416

 Score =  189 bits (479), Expect = 3e-46
 Identities = 85/115 (73%), Positives = 105/115 (91%)
 Frame = +1

Query: 1   QYIASSSMDKTVRVWDASQGHCIRVIYGVSSQLCIRFHPVNNNLLFVGNANKEISVMNFS 180
           QYIAS SMDKT+RVW+ S+G CIRV+YGVSSQLCI FHPVNNNLL VGNAN+EI+ +NFS
Sbjct: 228 QYIASCSMDKTMRVWEISKGTCIRVVYGVSSQLCICFHPVNNNLLLVGNANREINAINFS 287

Query: 181 TGRVINKAVFENEITAMDNDHTGQLIFSGDAQGCIYTVSVNSHTGSISRSHRNRN 345
           TGR+++K  F++ +TA+D DHTGQLIF+GDAQGCIYTVSVNSHTGS+SR+H+N++
Sbjct: 288 TGRIVSKLTFDDAVTALDVDHTGQLIFAGDAQGCIYTVSVNSHTGSLSRTHKNKS 342


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  189 bits (479), Expect = 3e-46
 Identities = 86/115 (74%), Positives = 105/115 (91%)
 Frame = +1

Query: 1   QYIASSSMDKTVRVWDASQGHCIRVIYGVSSQLCIRFHPVNNNLLFVGNANKEISVMNFS 180
           QYIAS+SMDKTVRVW+ S+G CIRVIYGVSSQLCIRFHPVNNN L VGNAN+EI+V NFS
Sbjct: 248 QYIASASMDKTVRVWELSKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANREITVFNFS 307

Query: 181 TGRVINKAVFENEITAMDNDHTGQLIFSGDAQGCIYTVSVNSHTGSISRSHRNRN 345
           TGR+INK VF++++T+MD+DHTG LIF GDAQGC+Y+ S++SHTG++SRSHR R+
Sbjct: 308 TGRIINKLVFDDKVTSMDHDHTGHLIFCGDAQGCVYSTSMDSHTGALSRSHRYRS 362


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