BLASTX nr result

ID: Dioscorea21_contig00026295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026295
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85971.1| predicted protein [Hordeum vulgare subsp. vulgare]    109   2e-22
gb|AFW85250.1| protein SUR2 [Zea mays]                                109   3e-22
gb|AAF43928.1|AC012188_5 Contains similarity to acid phosphatase...   108   5e-22
ref|NP_563944.1| sphingoid base hydroxylase 2 [Arabidopsis thali...   108   5e-22
ref|XP_002892798.1| hypothetical protein ARALYDRAFT_888804 [Arab...   108   5e-22

>dbj|BAJ85971.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 264

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
 Frame = +1

Query: 178 MALGISDEVLSTYVPVVVYWVFSGIYGLLGYIE--GCRLHPKNAENEENVASKIXXXXXX 351
           MA  +SDE+L T+VP+ VYW++SG+Y +L  +E    RLHPK  E  +NV SK       
Sbjct: 1   MAFAVSDELLGTFVPIAVYWLYSGLYIVLDRMEIDDYRLHPKGEEAVKNVVSKWTVVKGV 60

Query: 352 XXXXXXXXXXXXXMMKVVGGNNGAPTPQPSFLLSACQFLIAMVVLDLWQYFGHRYMHANK 531
                        +  ++G +NG    QP  L+ A QF+IAM V+D WQYF HRYMH NK
Sbjct: 61  LVQQGFQIAVSLLLFTIIGDDNGTVRKQPPALVIALQFIIAMFVMDTWQYFMHRYMHINK 120

Query: 532 FLFK 543
           FL+K
Sbjct: 121 FLYK 124


>gb|AFW85250.1| protein SUR2 [Zea mays]
          Length = 264

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/124 (42%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
 Frame = +1

Query: 178 MALGISDEVLSTYVPVVVYWVFSGIYGLLGYI--EGCRLHPKNAENEENVASKIXXXXXX 351
           MA  +SDE+L T+VP+ VYW++SG+Y +L  +  +  RLHPK  E  +N+ S+       
Sbjct: 1   MAFAVSDELLGTFVPIAVYWLYSGLYVVLDGLGMDDYRLHPKGEEEAKNIVSRSTVVRGV 60

Query: 352 XXXXXXXXXXXXXMMKVVGGNNGAPTPQPSFLLSACQFLIAMVVLDLWQYFGHRYMHANK 531
                        +  V+G  NGA   QP  L+ A QF++AM V+D WQYF HRYMH NK
Sbjct: 61  LVQQAFQIAVSLLLFTVLGDENGAVRKQPPALVLALQFIVAMFVMDTWQYFMHRYMHINK 120

Query: 532 FLFK 543
           FL+K
Sbjct: 121 FLYK 124


>gb|AAF43928.1|AC012188_5 Contains similarity to acid phosphatase from Lupinus albus
           gb|AB023385 and contains a Sterol desaturase PF|01598
           domain. EST gb|AI995340 comes from this gene
           [Arabidopsis thaliana]
          Length = 258

 Score =  108 bits (270), Expect = 5e-22
 Identities = 57/123 (46%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
 Frame = +1

Query: 178 MALGISDEVLSTYVPVVVYWVFSGIYGLLGYIEGCRLHPKNAENEENVASKIXXXXXXXX 357
           M+  ISDE L T+VP++VYWV+SG+Y  LG ++  RLH K  E+E+N+ SK         
Sbjct: 1   MSFVISDEFLGTFVPILVYWVYSGMYICLGSLDKYRLHSKIDEDEKNLVSKSAVVKGVLL 60

Query: 358 XXXXXXXXXXXMMKVVGGN-NGAPTPQPSFLLSACQFLIAMVVLDLWQYFGHRYMHANKF 534
                      + K+ G + + A T Q S LL A QF+IAM+V+D WQYF HRYMH NKF
Sbjct: 61  QQTLQAIISVILFKITGSDADAATTQQFSILLLARQFIIAMLVIDTWQYFIHRYMHLNKF 120

Query: 535 LFK 543
           L+K
Sbjct: 121 LYK 123


>ref|NP_563944.1| sphingoid base hydroxylase 2 [Arabidopsis thaliana]
           gi|75261765|sp|Q9AST3.1|SBH2_ARATH RecName:
           Full=Sphinganine C(4)-monooxygenase 2; AltName:
           Full=Sphingoid C4-hydroxylase 2; AltName: Full=Sphingoid
           base hydroxylase 2 gi|13605750|gb|AAK32868.1|AF361856_1
           At1g14290/F14L17_4 [Arabidopsis thaliana]
           gi|24797014|gb|AAN64519.1| At1g14290/F14L17_4
           [Arabidopsis thaliana] gi|332191018|gb|AEE29139.1|
           sphingoid base hydroxylase 2 [Arabidopsis thaliana]
          Length = 259

 Score =  108 bits (270), Expect = 5e-22
 Identities = 57/123 (46%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
 Frame = +1

Query: 178 MALGISDEVLSTYVPVVVYWVFSGIYGLLGYIEGCRLHPKNAENEENVASKIXXXXXXXX 357
           M+  ISDE L T+VP++VYWV+SG+Y  LG ++  RLH K  E+E+N+ SK         
Sbjct: 2   MSFVISDEFLGTFVPILVYWVYSGMYICLGSLDKYRLHSKIDEDEKNLVSKSAVVKGVLL 61

Query: 358 XXXXXXXXXXXMMKVVGGN-NGAPTPQPSFLLSACQFLIAMVVLDLWQYFGHRYMHANKF 534
                      + K+ G + + A T Q S LL A QF+IAM+V+D WQYF HRYMH NKF
Sbjct: 62  QQTLQAIISVILFKITGSDADAATTQQFSILLLARQFIIAMLVIDTWQYFIHRYMHLNKF 121

Query: 535 LFK 543
           L+K
Sbjct: 122 LYK 124


>ref|XP_002892798.1| hypothetical protein ARALYDRAFT_888804 [Arabidopsis lyrata subsp.
           lyrata] gi|297338640|gb|EFH69057.1| hypothetical protein
           ARALYDRAFT_888804 [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score =  108 bits (270), Expect = 5e-22
 Identities = 56/123 (45%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
 Frame = +1

Query: 178 MALGISDEVLSTYVPVVVYWVFSGIYGLLGYIEGCRLHPKNAENEENVASKIXXXXXXXX 357
           M+  ISDE L T+VP++VYWV+SG+Y  LG ++  RLH K  E+E+N+ +K         
Sbjct: 2   MSFAISDEFLGTFVPILVYWVYSGMYICLGSLDKYRLHSKIDEDEKNLVTKSAVVKGVLL 61

Query: 358 XXXXXXXXXXXMMKVVGGN-NGAPTPQPSFLLSACQFLIAMVVLDLWQYFGHRYMHANKF 534
                      + K+ G + + A T Q S LL A QF+IAM+V+D WQYF HRYMH NKF
Sbjct: 62  QQTLQAIISVILFKITGSDADAATTQQFSILLLARQFIIAMLVIDTWQYFIHRYMHLNKF 121

Query: 535 LFK 543
           L+K
Sbjct: 122 LYK 124


Top