BLASTX nr result

ID: Dioscorea21_contig00026276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026276
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein ...   138   5e-31
ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
gb|AAT08699.1| unknown [Hyacinthus orientalis]                        135   3e-30
gb|AFK33902.1| unknown [Medicago truncatula]                          132   3e-29
ref|XP_003596939.1| Membrane protein, putative [Medicago truncat...   132   4e-29

>ref|XP_002278573.1| PREDICTED: uncharacterized membrane protein yuiD [Vitis vinifera]
           gi|297737478|emb|CBI26679.3| unnamed protein product
           [Vitis vinifera]
          Length = 166

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/89 (75%), Positives = 82/89 (92%), Gaps = 2/89 (2%)
 Frame = -2

Query: 261 AGTTSA--PVPPSNLPLVSAFLAFSIAQFLKLFTTWFKEKRWDSRRLVGSGGMPSSHSAT 88
           AG+TS+   + P+NLPL+SAFL+F++AQFLKLFTTW+KEKRWDSRR++GSGGMPSSHSAT
Sbjct: 14  AGSTSSGSSIIPNNLPLLSAFLSFALAQFLKLFTTWYKEKRWDSRRMLGSGGMPSSHSAT 73

Query: 87  VTALAMAIGLQEGTGASSFAIAVILASIV 1
           VTALA+AIG QEGTG S+FAIAV+LA +V
Sbjct: 74  VTALAVAIGFQEGTGGSAFAIAVVLACVV 102


>ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|222860394|gb|EEE97941.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/85 (78%), Positives = 78/85 (91%), Gaps = 1/85 (1%)
 Frame = -2

Query: 252 TSAPVP-PSNLPLVSAFLAFSIAQFLKLFTTWFKEKRWDSRRLVGSGGMPSSHSATVTAL 76
           TS P   PSN+PL+SAFLAFS+AQFLKLFTTWFKEKRWD+RR++GSGGMPSSHSATVTAL
Sbjct: 18  TSPPASLPSNIPLLSAFLAFSLAQFLKLFTTWFKEKRWDARRMLGSGGMPSSHSATVTAL 77

Query: 75  AMAIGLQEGTGASSFAIAVILASIV 1
           A AIGLQEGTGA +FA+A++LA +V
Sbjct: 78  ATAIGLQEGTGAPAFAVALVLACVV 102


>gb|AAT08699.1| unknown [Hyacinthus orientalis]
          Length = 173

 Score =  135 bits (340), Expect = 3e-30
 Identities = 70/88 (79%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = -2

Query: 261 AGTTSAPVP-PSNLPLVSAFLAFSIAQFLKLFTTWFKEKRWDSRRLVGSGGMPSSHSATV 85
           A    +P+P  +NLP VSA LAFSIAQFLKLFTTWFKEKRWDS RL+GSGGMPSSHSATV
Sbjct: 18  AAAGQSPLPLATNLPFVSALLAFSIAQFLKLFTTWFKEKRWDSTRLLGSGGMPSSHSATV 77

Query: 84  TALAMAIGLQEGTGASSFAIAVILASIV 1
           TALA+AIGLQEGTG S FA+A ILASIV
Sbjct: 78  TALAVAIGLQEGTGGSLFALAAILASIV 105


>gb|AFK33902.1| unknown [Medicago truncatula]
          Length = 167

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/87 (74%), Positives = 77/87 (88%)
 Frame = -2

Query: 261 AGTTSAPVPPSNLPLVSAFLAFSIAQFLKLFTTWFKEKRWDSRRLVGSGGMPSSHSATVT 82
           A + S  VP SNLPL+SAFL+F++AQFLK+FTTW+KEKRWDS+RL+ SGGMPSSHSATV+
Sbjct: 15  ASSLSPLVPSSNLPLISAFLSFALAQFLKIFTTWYKEKRWDSKRLLDSGGMPSSHSATVS 74

Query: 81  ALAMAIGLQEGTGASSFAIAVILASIV 1
           ALA+AIG QEG G+S FAIAVILA IV
Sbjct: 75  ALAVAIGFQEGIGSSVFAIAVILACIV 101


>ref|XP_003596939.1| Membrane protein, putative [Medicago truncatula]
           gi|355485987|gb|AES67190.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 167

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/87 (74%), Positives = 77/87 (88%)
 Frame = -2

Query: 261 AGTTSAPVPPSNLPLVSAFLAFSIAQFLKLFTTWFKEKRWDSRRLVGSGGMPSSHSATVT 82
           A + S  VP SNLPL+SAFL+F++AQFLK+FTTW+KEKRWDS+RL+ SGGMPSSHSATV+
Sbjct: 15  ASSLSPFVPSSNLPLISAFLSFALAQFLKIFTTWYKEKRWDSKRLLDSGGMPSSHSATVS 74

Query: 81  ALAMAIGLQEGTGASSFAIAVILASIV 1
           ALA+AIG QEG G+S FAIAVILA IV
Sbjct: 75  ALAVAIGFQEGIGSSVFAIAVILACIV 101


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