BLASTX nr result

ID: Dioscorea21_contig00026268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026268
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD27710.1| putative flowering locus T [Oryza sativa Japonic...   140   2e-31
ref|XP_002451827.1| hypothetical protein SORBIDRAFT_04g008320 [S...   138   6e-31
dbj|BAD01561.1| flowering locus T [Populus nigra] gi|41351511|db...   137   1e-30
gb|AFU08240.1| flowering locus T [Populus tomentosa]                  137   1e-30
gb|AFB71091.1| flowering locus T 2 [Xanthium strumarium]              137   1e-30

>dbj|BAD27710.1| putative flowering locus T [Oryza sativa Japonica Group]
           gi|125538720|gb|EAY85115.1| hypothetical protein
           OsI_06466 [Oryza sativa Indica Group]
           gi|125581406|gb|EAZ22337.1| hypothetical protein
           OsJ_05992 [Oryza sativa Japonica Group]
          Length = 185

 Score =  140 bits (352), Expect = 2e-31
 Identities = 64/101 (63%), Positives = 80/101 (79%)
 Frame = +2

Query: 2   LERPLLWMRRLVTDIPAADGLDFGRELICYERPSPTFGIHRIVFILFRQLGRDTVFAPVM 181
           L   L WM   VTDIPA+    +GRE++CYE P+PT GIHR+V +LFRQLGR+TV+AP +
Sbjct: 81  LREYLHWM---VTDIPASTDATYGREVVCYESPNPTTGIHRMVLVLFRQLGRETVYAPAV 137

Query: 182 RHNFITRNFAQQYNLGSPIAAMYFNCQRETGSGGRRFRPEY 304
           RHNF TR FA++YNLG+P+AA+YFNCQR+ GSGGRRF   Y
Sbjct: 138 RHNFTTRAFARRYNLGAPVAAVYFNCQRQAGSGGRRFTGPY 178


>ref|XP_002451827.1| hypothetical protein SORBIDRAFT_04g008320 [Sorghum bicolor]
           gi|241931658|gb|EES04803.1| hypothetical protein
           SORBIDRAFT_04g008320 [Sorghum bicolor]
          Length = 182

 Score =  138 bits (348), Expect = 6e-31
 Identities = 65/101 (64%), Positives = 79/101 (78%)
 Frame = +2

Query: 2   LERPLLWMRRLVTDIPAADGLDFGRELICYERPSPTFGIHRIVFILFRQLGRDTVFAPVM 181
           L   L WM   VTDIPA+    +GRE++CYE P+PT GIHR+V +LFRQLGR+TV+AP  
Sbjct: 79  LREYLHWM---VTDIPASTDDTYGREVMCYEAPNPTTGIHRMVLVLFRQLGRETVYAPSW 135

Query: 182 RHNFITRNFAQQYNLGSPIAAMYFNCQRETGSGGRRFRPEY 304
           RHNF TR FA++YNLG+P+AAMYFNCQR+ GSGGRRF   Y
Sbjct: 136 RHNFSTRGFARRYNLGAPVAAMYFNCQRQNGSGGRRFTGAY 176


>dbj|BAD01561.1| flowering locus T [Populus nigra] gi|41351511|dbj|BAD08337.1|
           flowering locus T [Populus nigra]
           gi|169990902|dbj|BAG12900.1| FLOWERING LOCUS T [Populus
           nigra]
          Length = 174

 Score =  137 bits (345), Expect = 1e-30
 Identities = 62/90 (68%), Positives = 75/90 (83%)
 Frame = +2

Query: 20  WMRRLVTDIPAADGLDFGRELICYERPSPTFGIHRIVFILFRQLGRDTVFAPVMRHNFIT 199
           ++  LVTDIPA  G +FG+E++CYE P PT GIHR VF+LFRQLGR TV+AP  R NF T
Sbjct: 84  YLHWLVTDIPATTGANFGQEVVCYESPRPTAGIHRFVFVLFRQLGRQTVYAPGWRQNFNT 143

Query: 200 RNFAQQYNLGSPIAAMYFNCQRETGSGGRR 289
           R+FA+ YNLGSP+AA+YFNCQRE+GSGGRR
Sbjct: 144 RDFAELYNLGSPVAAVYFNCQRESGSGGRR 173


>gb|AFU08240.1| flowering locus T [Populus tomentosa]
          Length = 174

 Score =  137 bits (345), Expect = 1e-30
 Identities = 62/90 (68%), Positives = 75/90 (83%)
 Frame = +2

Query: 20  WMRRLVTDIPAADGLDFGRELICYERPSPTFGIHRIVFILFRQLGRDTVFAPVMRHNFIT 199
           ++  LVTDIPA  G +FG+E++CYE P PT GIHR VF+LFRQLGR TV+AP  R NF T
Sbjct: 84  YLHWLVTDIPATTGANFGQEVVCYESPRPTAGIHRFVFVLFRQLGRQTVYAPGWRQNFNT 143

Query: 200 RNFAQQYNLGSPIAAMYFNCQRETGSGGRR 289
           R+FA+ YNLGSP+AA+YFNCQRE+GSGGRR
Sbjct: 144 RDFAELYNLGSPVAAVYFNCQRESGSGGRR 173


>gb|AFB71091.1| flowering locus T 2 [Xanthium strumarium]
          Length = 175

 Score =  137 bits (345), Expect = 1e-30
 Identities = 62/90 (68%), Positives = 74/90 (82%)
 Frame = +2

Query: 20  WMRRLVTDIPAADGLDFGRELICYERPSPTFGIHRIVFILFRQLGRDTVFAPVMRHNFIT 199
           ++  LVTDIPA  G  FG+EL+CYE P P+ GIHR+VF+LFRQLGR TV+AP  R NF T
Sbjct: 85  YLHWLVTDIPATTGARFGQELVCYESPRPSMGIHRMVFVLFRQLGRQTVYAPAWRQNFNT 144

Query: 200 RNFAQQYNLGSPIAAMYFNCQRETGSGGRR 289
           R+FA+ YNLGSP+AA YFNCQRE+GSGGRR
Sbjct: 145 RDFAELYNLGSPVAAAYFNCQRESGSGGRR 174


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