BLASTX nr result

ID: Dioscorea21_contig00026203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026203
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]     82   6e-14
gb|AAT38747.2| Polyprotein, putative [Solanum demissum]                81   1e-13
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]            78   6e-13
emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera]    78   6e-13
emb|CAN65144.1| hypothetical protein VITISV_026080 [Vitis vinifera]    78   6e-13

>gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]
          Length = 1472

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
 Frame = +3

Query: 9   SSGNAFLA--SRDSSWIIDSGASSHMTGTKSFFQNLSPSVF---RSVAIADGRSCLVSGE 173
           S   AF++  +  SSWI+DSGAS H+TG    F +  P  F    ++  ADG SC V GE
Sbjct: 351 SFNQAFMSMNTSHSSWILDSGASRHVTGMSGEFTSYKPYSFAHKETIQTADGTSCQVKGE 410

Query: 174 GVVQASSQLKLTNVLFVPEFPVNLLSVSAITKQLNC 281
           G+VQ +  + L++VL+V  FPVNL+S+S++   ++C
Sbjct: 411 GIVQCTPSITLSSVLYVHSFPVNLISISSLVDNMDC 446


>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/91 (47%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = +3

Query: 12  SGNAFLASRDSSWIIDSGASSHMTGTKSFFQNLSP-SVFRSVAIADGRSCLVSGEGVVQA 188
           SGN  L S  S+WIIDSGA+ HMTG   FF       V  SV I DG S  + G G V  
Sbjct: 353 SGNKCLISSSSNWIIDSGATDHMTGNPKFFSKFQAHKVPSSVTIVDGSSYTIEGSGTVNH 412

Query: 189 SSQLKLTNVLFVPEFPVNLLSVSAITKQLNC 281
           +S + L++VL +P    NL+SVS +TK+L C
Sbjct: 413 TSSITLSSVLGLPSHAFNLISVSKLTKELKC 443


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/91 (42%), Positives = 52/91 (57%)
 Frame = +3

Query: 12  SGNAFLASRDSSWIIDSGASSHMTGTKSFFQNLSPSVFRSVAIADGRSCLVSGEGVVQAS 191
           SG   L S  + WIIDSGA+ HMTG    F          V +ADG +  + G G V+ +
Sbjct: 320 SGKTCLVSSSNKWIIDSGATDHMTGNHKTFSTFRTHSAPPVTVADGSTYEIKGSGTVKPT 379

Query: 192 SQLKLTNVLFVPEFPVNLLSVSAITKQLNCS 284
           S + L++VL +P    NL+SVS +TK LNCS
Sbjct: 380 SSITLSSVLNLPNLAFNLISVSKLTKNLNCS 410


>emb|CAN63534.1| hypothetical protein VITISV_001206 [Vitis vinifera]
          Length = 1189

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/91 (42%), Positives = 52/91 (57%)
 Frame = +3

Query: 12  SGNAFLASRDSSWIIDSGASSHMTGTKSFFQNLSPSVFRSVAIADGRSCLVSGEGVVQAS 191
           SG   L S  + WIIDSGA+ HMTG    F          V +ADG +  + G G V+ +
Sbjct: 320 SGKTCLVSSSNKWIIDSGATDHMTGNHKTFSTFRTHSAPPVTVADGSTYEIKGSGTVKPT 379

Query: 192 SQLKLTNVLFVPEFPVNLLSVSAITKQLNCS 284
           S + L++VL +P    NL+SVS +TK LNCS
Sbjct: 380 SSITLSSVLNLPNLAFNLISVSKLTKNLNCS 410


>emb|CAN65144.1| hypothetical protein VITISV_026080 [Vitis vinifera]
          Length = 1220

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/91 (42%), Positives = 52/91 (57%)
 Frame = +3

Query: 12  SGNAFLASRDSSWIIDSGASSHMTGTKSFFQNLSPSVFRSVAIADGRSCLVSGEGVVQAS 191
           SG   L S  + WIIDSGA+ HMTG    F          V +ADG +  + G G V+ +
Sbjct: 297 SGKTCLVSSSNKWIIDSGATDHMTGNHKTFSTFRTHSAPPVTVADGSTYEIKGSGTVKPT 356

Query: 192 SQLKLTNVLFVPEFPVNLLSVSAITKQLNCS 284
           S + L++VL +P    NL+SVS +TK LNCS
Sbjct: 357 SSITLSSVLNLPNLAFNLISVSKLTKNLNCS 387


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