BLASTX nr result
ID: Dioscorea21_contig00026202
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00026202 (972 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi... 317 4e-84 emb|CBI36234.3| unnamed protein product [Vitis vinifera] 307 2e-81 ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi... 300 3e-79 ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 298 1e-78 ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|2... 298 2e-78 >ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510, chloroplastic-like [Vitis vinifera] Length = 872 Score = 317 bits (811), Expect = 4e-84 Identities = 143/202 (70%), Positives = 168/202 (83%) Frame = -2 Query: 971 WGALLNGCRIHRQVDLGELAANYLFELDTQSTGYYVLLCNLYANSDRWDQVARVRKEMRE 792 WGALLN CRI++ V+LGELAA ++FE+DT+S GYY+LLCNLYA+S +WD+VARVRK MRE Sbjct: 668 WGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRE 727 Query: 791 RGLTIDPGCSWVEVKGMVHAFLSGDESHPQSKEINGALNGLYERIKSAGFDLPDNDMVDK 612 LT+DPGCSWVEV G VHAFL+GD+ HPQ KEIN L G YE++++ G + + D Sbjct: 728 NRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDD 787 Query: 611 AEASKAEIFCGHSERLAIAFGLISTAPGTAIWVTKNLYMCQGCHALVKSISKIVRREITV 432 +ASKAEIFCGHSERLAIAFGLI+T PGT IWVTKNLYMC+ CH VK ISK+VRR I+V Sbjct: 788 IDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISV 847 Query: 431 RDTEQFHHFKDGKCSCGDEGYW 366 RDTEQFHHFKDG CSCGDEGYW Sbjct: 848 RDTEQFHHFKDGVCSCGDEGYW 869 >emb|CBI36234.3| unnamed protein product [Vitis vinifera] Length = 906 Score = 307 bits (787), Expect = 2e-81 Identities = 140/199 (70%), Positives = 165/199 (82%) Frame = -2 Query: 971 WGALLNGCRIHRQVDLGELAANYLFELDTQSTGYYVLLCNLYANSDRWDQVARVRKEMRE 792 WGALLN CRI++ V+LGELAA ++FE+DT+S GYY+LLCNLYA+S +WD+VARVRK MRE Sbjct: 668 WGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRE 727 Query: 791 RGLTIDPGCSWVEVKGMVHAFLSGDESHPQSKEINGALNGLYERIKSAGFDLPDNDMVDK 612 LT+DPGCSWVEV G VHAFL+GD+ HPQ KEIN L G YE++++ G + + D Sbjct: 728 NRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDD 787 Query: 611 AEASKAEIFCGHSERLAIAFGLISTAPGTAIWVTKNLYMCQGCHALVKSISKIVRREITV 432 +ASKAEIFCGHSERLAIAFGLI+T PGT IWVTKNLYMC+ CH VK ISK+VRR I+V Sbjct: 788 IDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISV 847 Query: 431 RDTEQFHHFKDGKCSCGDE 375 RDTEQFHHFKDG CSCGDE Sbjct: 848 RDTEQFHHFKDGVCSCGDE 866 >ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510, chloroplastic-like [Cucumis sativus] Length = 878 Score = 300 bits (769), Expect = 3e-79 Identities = 137/202 (67%), Positives = 160/202 (79%) Frame = -2 Query: 971 WGALLNGCRIHRQVDLGELAANYLFELDTQSTGYYVLLCNLYANSDRWDQVARVRKEMRE 792 WGALLN CRIHR V+LGE+AA +FE D +S GYY+LLCNLYA WD+V++VR MRE Sbjct: 671 WGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRE 730 Query: 791 RGLTIDPGCSWVEVKGMVHAFLSGDESHPQSKEINGALNGLYERIKSAGFDLPDNDMVDK 612 RGL+ DPGCSWVE+KG VHAFLSGD SH QSKEING L+G ++K GF + + Sbjct: 731 RGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSE 790 Query: 611 AEASKAEIFCGHSERLAIAFGLISTAPGTAIWVTKNLYMCQGCHALVKSISKIVRREITV 432 E+S+A+IFCGHSER AIAFGLI+TAPG IWVTKNLYMC CH +VK IS IVRREI+V Sbjct: 791 IESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISV 850 Query: 431 RDTEQFHHFKDGKCSCGDEGYW 366 RD E++HHFKDG CSCGDEGYW Sbjct: 851 RDVEEYHHFKDGVCSCGDEGYW 872 >ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g15510, chloroplastic-like [Cucumis sativus] Length = 878 Score = 298 bits (763), Expect = 1e-78 Identities = 136/202 (67%), Positives = 159/202 (78%) Frame = -2 Query: 971 WGALLNGCRIHRQVDLGELAANYLFELDTQSTGYYVLLCNLYANSDRWDQVARVRKEMRE 792 WGALLN CRIHR V+LGE+AA +FE D +S GYY+LLCNLYA WD+V++VR MRE Sbjct: 671 WGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRE 730 Query: 791 RGLTIDPGCSWVEVKGMVHAFLSGDESHPQSKEINGALNGLYERIKSAGFDLPDNDMVDK 612 RGL+ DPGCSWVE+KG VHAFLSGD SH QSKEING L+G ++K GF + + Sbjct: 731 RGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSE 790 Query: 611 AEASKAEIFCGHSERLAIAFGLISTAPGTAIWVTKNLYMCQGCHALVKSISKIVRREITV 432 E+S+A+IFCGHSER AIAFGLI+TAPG IWV KNLYMC CH +VK IS IVRREI+V Sbjct: 791 IESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISV 850 Query: 431 RDTEQFHHFKDGKCSCGDEGYW 366 RD E++HHFKDG CSCGDEGYW Sbjct: 851 RDVEEYHHFKDGVCSCGDEGYW 872 >ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa] Length = 805 Score = 298 bits (762), Expect = 2e-78 Identities = 136/198 (68%), Positives = 163/198 (82%) Frame = -2 Query: 971 WGALLNGCRIHRQVDLGELAANYLFELDTQSTGYYVLLCNLYANSDRWDQVARVRKEMRE 792 WGALLN CRIHR V LGELAA ++F+ D +S GYY+LLCNLYA+S +WD+VA+VR+ M+E Sbjct: 608 WGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKE 667 Query: 791 RGLTIDPGCSWVEVKGMVHAFLSGDESHPQSKEINGALNGLYERIKSAGFDLPDNDMVDK 612 GL +DPGCSWVEVKG VHAFLSGD HPQ +EIN L G YE++K++GF+ + +D Sbjct: 668 EGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQECSSMDG 727 Query: 611 AEASKAEIFCGHSERLAIAFGLISTAPGTAIWVTKNLYMCQGCHALVKSISKIVRREITV 432 + SKA+IFCGHSER AIA+ LI++APG IWVTKNLYMCQ CH+ VK ISKIVRREI+V Sbjct: 728 IQTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISV 787 Query: 431 RDTEQFHHFKDGKCSCGD 378 RDTEQFHHFKDG CSCGD Sbjct: 788 RDTEQFHHFKDGLCSCGD 805