BLASTX nr result

ID: Dioscorea21_contig00026185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026185
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK00874.1| predicted protein [Hordeum vulgare subsp. vulgare]    147   7e-34
gb|ADE76162.1| unknown [Picea sitchensis]                             145   3e-33
ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]     143   1e-32
ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]     142   2e-32
ref|XP_003571680.1| PREDICTED: protein CLP1 homolog [Brachypodiu...   142   4e-32

>dbj|BAK00874.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 438

 Score =  147 bits (372), Expect = 7e-34
 Identities = 76/132 (57%), Positives = 93/132 (70%), Gaps = 4/132 (3%)
 Frame = +3

Query: 15  LFGTELPLRTWLSIPPY----IFTWNGSMIELEGNNDVCVSYECLF*MPMMKHWKFHENL 182
           +FGTELP   WL+IPP     IFTW+G+ +EL+G   V  S       PM+ +   H  L
Sbjct: 49  IFGTELPPEGWLTIPPRSKIAIFTWHGATVELDG---VSESEYTSDETPMVIYVNAHAIL 105

Query: 183 DRRRVRAKVATNSCFDSSQGPRVIVIGPTDSGKSSVCKMLLSWACKKSWKPTFVDLDIGQ 362
           D RR RA+ A     ++SQGPRVIV+GPTDSGKS++CKMLLSWA K  WKPT+VDLDIGQ
Sbjct: 106 DARRARARAAQGGDLEASQGPRVIVVGPTDSGKSTLCKMLLSWAAKLGWKPTYVDLDIGQ 165

Query: 363 RSVTIPGCIAAT 398
            S+TIPGCI+AT
Sbjct: 166 GSITIPGCISAT 177


>gb|ADE76162.1| unknown [Picea sitchensis]
          Length = 425

 Score =  145 bits (366), Expect = 3e-33
 Identities = 77/136 (56%), Positives = 98/136 (72%), Gaps = 8/136 (5%)
 Frame = +3

Query: 15  LFGTELPLRTWLSIPPY----IFTWNGSMIELEGNNDVC-VSYECLF*MPMMKHWKFHEN 179
           +FGTELP + WL+ PP     IFTWNG+ +E++G  +V  V+ E     PM+ +   H  
Sbjct: 36  IFGTELPPQYWLTFPPAHKFAIFTWNGATVEVDGIAEVAYVADET----PMVSYVNVHAV 91

Query: 180 LDRRRVRAK---VATNSCFDSSQGPRVIVIGPTDSGKSSVCKMLLSWACKKSWKPTFVDL 350
           L+RRRVRAK   ++  S    SQGPR+IV+GPTDSGKSS+ +MLLSWA + SWKPTFVDL
Sbjct: 92  LERRRVRAKEASISNPSNHSESQGPRIIVVGPTDSGKSSLARMLLSWAARLSWKPTFVDL 151

Query: 351 DIGQRSVTIPGCIAAT 398
           DIGQ S++IPGCIAAT
Sbjct: 152 DIGQGSISIPGCIAAT 167


>ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 438

 Score =  143 bits (361), Expect = 1e-32
 Identities = 73/132 (55%), Positives = 92/132 (69%), Gaps = 4/132 (3%)
 Frame = +3

Query: 15  LFGTELPLRTWLSIPPY----IFTWNGSMIELEGNNDVCVSYECLF*MPMMKHWKFHENL 182
           +FGTELP   WL+ PP     +FTW G+ IE++G  +   + +     PM+ +   H  L
Sbjct: 50  IFGTELPPEIWLNFPPRLKFAVFTWYGATIEMDGATETDYTADET---PMVSYVNVHAVL 106

Query: 183 DRRRVRAKVATNSCFDSSQGPRVIVIGPTDSGKSSVCKMLLSWACKKSWKPTFVDLDIGQ 362
           D RR RAK ++     SSQGPRVIV+GPTDSGKS++ +MLLSWA K+ WKPTFVDLDIGQ
Sbjct: 107 DGRRSRAKASSPDDSGSSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQ 166

Query: 363 RSVTIPGCIAAT 398
            S+TIPGCIAAT
Sbjct: 167 GSITIPGCIAAT 178


>ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 432

 Score =  142 bits (359), Expect = 2e-32
 Identities = 73/132 (55%), Positives = 92/132 (69%), Gaps = 4/132 (3%)
 Frame = +3

Query: 15  LFGTELPLRTWLSIPPY----IFTWNGSMIELEGNNDVCVSYECLF*MPMMKHWKFHENL 182
           +FGTELP   WL+ PP     +FTW G+ IE++G  +   + +     PM+ +   H  L
Sbjct: 44  IFGTELPPEIWLNFPPRLKFAVFTWYGATIEMDGATETDYTADET---PMVSYVNVHAVL 100

Query: 183 DRRRVRAKVATNSCFDSSQGPRVIVIGPTDSGKSSVCKMLLSWACKKSWKPTFVDLDIGQ 362
           D RR RAK ++     SSQGPRVIV+GPTDSGKS++ +MLLSWA K+ WKPTFVDLDIGQ
Sbjct: 101 DGRRSRAKASSPDDSVSSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQ 160

Query: 363 RSVTIPGCIAAT 398
            S+TIPGCIAAT
Sbjct: 161 GSITIPGCIAAT 172


>ref|XP_003571680.1| PREDICTED: protein CLP1 homolog [Brachypodium distachyon]
          Length = 440

 Score =  142 bits (357), Expect = 4e-32
 Identities = 74/134 (55%), Positives = 93/134 (69%), Gaps = 6/134 (4%)
 Frame = +3

Query: 15  LFGTELPLRTWLSIPPY----IFTWNGSMIELEGNNDVCVSYECLF*MPMMKHWKFHENL 182
           +FGTELP   W+ +PP     IFTW+G+ +EL+G   V  S       PM+ +   H  L
Sbjct: 49  IFGTELPPEGWVPVPPRSKIAIFTWHGATVELDG---VSESEYTSDETPMVIYVNTHAIL 105

Query: 183 DRRRVRAKVAT--NSCFDSSQGPRVIVIGPTDSGKSSVCKMLLSWACKKSWKPTFVDLDI 356
           D RR RA+ A       ++SQGPRVIV+GPTDSGKS++CKMLLSWA K+ WKPT+VDLDI
Sbjct: 106 DARRARARAAAAQGGDLEASQGPRVIVVGPTDSGKSTLCKMLLSWAAKQGWKPTYVDLDI 165

Query: 357 GQRSVTIPGCIAAT 398
           GQ S+TIPGCI+AT
Sbjct: 166 GQGSITIPGCISAT 179


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