BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026176
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879469.1| pentatricopeptide repeat-containing protein ...    87   2e-15
ref|NP_180932.1| pentatricopeptide repeat-containing protein [Ar...    84   9e-15
ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_002318172.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14

>ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325308|gb|EFH55728.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 583

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/106 (39%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3   SLLSFYASCGDSLSARKLFDRSPHRNNVAVWNAIISGFVKHGWSHDALE-FFRLLLLYTE 179
           +L++FY+ CGD  +AR++FDR P ++ VA WN+++SGF ++G + DA+  F+++     E
Sbjct: 147 ALVTFYSKCGDMEAARQVFDRMPEKSVVA-WNSLVSGFEQNGLAEDAIRVFYQMRESGFE 205

Query: 180 PDEITFISVLAACSHLGALNVVRWIENTL--KGM-IDVKIGTALVD 308
           PD  TF+S+L+AC+  GA+++  W+   +  +G+ ++VK+GTAL++
Sbjct: 206 PDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALIN 251



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   SLLSFYASCGDSLSARKLFDRSPHRNNVAVWNAIISGFVKHGWSHDALEFFRLLL--LYT 176
           +L++ Y+ CGD   AR++FD+     NVA W A+IS +  HG+   A++ F  +     +
Sbjct: 248 ALINLYSRCGDVGKAREVFDKMKE-TNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGS 306

Query: 177 EPDEITFISVLAACSHLG 230
            P+ +TF++VL+AC+H G
Sbjct: 307 IPNNVTFVAVLSACAHAG 324


>ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75101013|sp|P93011.1|PP182_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g33760 gi|1707020|gb|AAC69141.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253787|gb|AEC08881.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 583

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/106 (38%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3   SLLSFYASCGDSLSARKLFDRSPHRNNVAVWNAIISGFVKHGWSHDALE-FFRLLLLYTE 179
           +L++FY+ CGD   AR++FDR P ++ VA WN+++SGF ++G + +A++ F+++     E
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVA-WNSLVSGFEQNGLADEAIQVFYQMRESGFE 205

Query: 180 PDEITFISVLAACSHLGALNVVRWIENTL--KGM-IDVKIGTALVD 308
           PD  TF+S+L+AC+  GA+++  W+   +  +G+ ++VK+GTAL++
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = +3

Query: 3   SLLSFYASCGDSLSARKLFDRSPHRNNVAVWNAIISGFVKHGWSHDALEFFRLLL--LYT 176
           +L++ Y+ CGD   AR++FD+     NVA W A+IS +  HG+   A+E F  +      
Sbjct: 248 ALINLYSRCGDVGKAREVFDKMKE-TNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306

Query: 177 EPDEITFISVLAACSHLG 230
            P+ +TF++VL+AC+H G
Sbjct: 307 IPNNVTFVAVLSACAHAG 324


>ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|222870841|gb|EEF07972.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/106 (39%), Positives = 73/106 (68%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3   SLLSFYASCGDSLSARKLFDRSPHRNNVAVWNAIISGFVKHGWSHDALEFF-RLLLLYTE 179
           +L++ Y  CGD ++ARK+FD+   R+ VA WN++ISG+ ++G++ +A+  F R+     E
Sbjct: 151 ALVALYGKCGDLINARKVFDKIRERSIVA-WNSMISGYEQNGFAKEAIGLFDRMKETGVE 209

Query: 180 PDEITFISVLAACSHLGALNVVRWIENTLKGM---IDVKIGTALVD 308
           PD  TF+SVL+AC+HLGA ++  W+   + G    ++V +GT+L++
Sbjct: 210 PDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLIN 255



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   SLLSFYASCGDSLSARKLFDRSPHRNNVAVWNAIISGFVKHGWSHDALEFFRLLLLY-TE 179
           SL++ Y  CG+   AR++FD    RN VA W A+ISG+  +G+   A+E F  +      
Sbjct: 252 SLINMYIRCGNVSKAREVFDSMKERNVVA-WTAMISGYGTNGYGSQAVELFHEMRRNGLF 310

Query: 180 PDEITFISVLAACSHLGALN 239
           P+ ITF++VL+AC+H G +N
Sbjct: 311 PNSITFVAVLSACAHAGLVN 330


>ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/106 (43%), Positives = 72/106 (67%), Gaps = 5/106 (4%)
 Frame = +3

Query: 3   SLLSFYASCGDSLSARKLFDRSPHRNNVAVWNAIISGFVKHGWSHDALEFFRLLLLYT-- 176
           SL++ YA CG   SARK+FD  PHR++V+ WN++I+G+ K G + +A+E FR +      
Sbjct: 162 SLITAYARCGLVASARKVFDEIPHRDSVS-WNSMIAGYAKAGCAREAVEVFREMGRRDGF 220

Query: 177 EPDEITFISVLAACSHLGALNVVRWIENTL--KGM-IDVKIGTALV 305
           EPDE++ +S+L AC  LG L + RW+E  +  +GM ++  IG+AL+
Sbjct: 221 EPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALI 266



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/106 (35%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3   SLLSFYASCGDSLSARKLFDRSPHRNNVAVWNAIISGFVKHGWSHDALEFFR-LLLLYTE 179
           +L+S YA CG+  SAR++FD    R +V  WNA+ISG+ ++G + +A+  F  +      
Sbjct: 264 ALISMYAKCGELESARRIFDGMAAR-DVITWNAVISGYAQNGMADEAILLFHGMKEDCVT 322

Query: 180 PDEITFISVLAACSHLGALNVVRWIEN--TLKG-MIDVKIGTALVD 308
            ++IT  +VL+AC+ +GAL++ + I+   + +G   D+ + TAL+D
Sbjct: 323 ANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALID 368


>ref|XP_002318172.1| predicted protein [Populus trichocarpa] gi|222858845|gb|EEE96392.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/106 (40%), Positives = 71/106 (66%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3   SLLSFYASCGDSLSARKLFDRSPHRNNVAVWNAIISGFVKHGWSHDALEFFR-LLLLYTE 179
           +L+  Y  CGD +SAR++FD  P+++ V  WNAII+G+ ++G S++A+  F  +      
Sbjct: 269 ALIDMYGKCGDLISARRVFDSMPNKD-VVTWNAIITGYAQNGASNEAIVLFNGMREAGPH 327

Query: 180 PDEITFISVLAACSHLGALNVVRWIEN--TLKGM-IDVKIGTALVD 308
           PD +T I VL+ACS +GAL++ +W+E   + KG+  DV + +AL+D
Sbjct: 328 PDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALID 373



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3   SLLSFYASCGDSLSARKLFDRSPHRNNVAVWNAIISGFVKHGWSHDALEFFRLLLLYT-E 179
           SL++ YA CG+   ARK+FD    R+ V+ WN++ISG+ K G++ +A+  F  +     E
Sbjct: 168 SLITMYARCGEMGFARKVFDEMGDRDLVS-WNSMISGYSKMGFTKEAIGLFMEMREEGFE 226

Query: 180 PDEITFISVLAACSHLGALNVVRWIENTL---KGMIDVKIGTALVD 308
           PDE+T +SVL AC  LG L + RW+E  +   K  ++  +G+AL+D
Sbjct: 227 PDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALID 272



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
 Frame = +3

Query: 3   SLLSFYASCGDSLSARKLFDRSPHRNNVAVWNAIISGFVKHGWSHDALEFFRLLLL---Y 173
           +L+  YA CG    A ++F+  PH+N V+ WNA+IS    HG + +AL  FR +      
Sbjct: 370 ALIDMYAKCGSLDDAVRVFESMPHKNEVS-WNAMISALAFHGQAQEALSLFRRMSKDNGT 428

Query: 174 TEPDEITFISVLAACSHLGALN 239
            +P++ITFI VL+AC H G ++
Sbjct: 429 VQPNDITFIGVLSACVHAGLVD 450