BLASTX nr result

ID: Dioscorea21_contig00026119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026119
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P48407.1|DPS1_PINST RecName: Full=Pinosylvin synthase 1; AltN...   122   2e-26
pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synth...   122   4e-26
sp|P48408.1|DPS2_PINST RecName: Full=Pinosylvin synthase 2; AltN...   120   1e-25
pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From ...   120   1e-25
gb|AAB24341.2| pinosylvin-forming stilbene synthase [Pinus sylve...   119   2e-25

>sp|P48407.1|DPS1_PINST RecName: Full=Pinosylvin synthase 1; AltName: Full=Stilbene
           synthase 1; Short=STS 1 gi|762992|emb|CAA87012.1|
           stilbene synthase [Pinus strobus]
           gi|1095543|prf||2109262B stilbene synthase:ISOTYPE=1
          Length = 396

 Score =  122 bits (307), Expect = 2e-26
 Identities = 55/87 (63%), Positives = 70/87 (80%)
 Frame = -1

Query: 265 KAKKGGGLASVLALGTANPPNVFYQDAFPDFYFRITNNEHKVELKNKFKRICEGSMIKKR 86
           K+++  G AS+LA+GTANPPNV  Q  +PD+YFR+TNNE   +LK+KFKRICE S IKKR
Sbjct: 14  KSQRADGFASILAIGTANPPNVVDQSTYPDYYFRVTNNEDNTDLKDKFKRICERSAIKKR 73

Query: 85  HMFWTEEMLKQKPNVCAFMEENSLDTR 5
           HM+ TEE+LK+ P +CAF+E  SLDTR
Sbjct: 74  HMYLTEEILKKNPELCAFLEVPSLDTR 100


>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
           Cyclization Specificity Of Type Iii Polyketide
           Synthases: Pine Stilbene Synthase Structure
           gi|56554106|pdb|1U0U|B Chain B, An Aldol Switch
           Discovered In Stilbene Synthases Mediates Cyclization
           Specificity Of Type Iii Polyketide Synthases: Pine
           Stilbene Synthase Structure gi|56554107|pdb|1U0U|C Chain
           C, An Aldol Switch Discovered In Stilbene Synthases
           Mediates Cyclization Specificity Of Type Iii Polyketide
           Synthases: Pine Stilbene Synthase Structure
           gi|56554108|pdb|1U0U|D Chain D, An Aldol Switch
           Discovered In Stilbene Synthases Mediates Cyclization
           Specificity Of Type Iii Polyketide Synthases: Pine
           Stilbene Synthase Structure gi|56554109|pdb|1U0U|E Chain
           E, An Aldol Switch Discovered In Stilbene Synthases
           Mediates Cyclization Specificity Of Type Iii Polyketide
           Synthases: Pine Stilbene Synthase Structure
           gi|56554110|pdb|1U0U|F Chain F, An Aldol Switch
           Discovered In Stilbene Synthases Mediates Cyclization
           Specificity Of Type Iii Polyketide Synthases: Pine
           Stilbene Synthase Structure
          Length = 397

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
 Frame = -1

Query: 295 NNGSNGVDDH---KAKKGGGLASVLALGTANPPNVFYQDAFPDFYFRITNNEHKVELKNK 125
           ++G  GVD     K ++  G AS+LA+GTANPPN   Q  +PDFYFRIT NEH  ELK+K
Sbjct: 2   SHGMGGVDFEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDK 61

Query: 124 FKRICEGSMIKKRHMFWTEEMLKQKPNVCAFMEENSLDTR 5
           FKRICE S IK+R+M+ TEE+LK+ P+VCAF+E  SLD R
Sbjct: 62  FKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDAR 101


>sp|P48408.1|DPS2_PINST RecName: Full=Pinosylvin synthase 2; AltName: Full=Stilbene
           synthase 2; Short=STS 2 gi|762994|emb|CAA87013.1|
           stilbene synthase [Pinus strobus]
           gi|1095542|prf||2109262A stilbene synthase:ISOTYPE=2
          Length = 396

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/87 (63%), Positives = 69/87 (79%)
 Frame = -1

Query: 265 KAKKGGGLASVLALGTANPPNVFYQDAFPDFYFRITNNEHKVELKNKFKRICEGSMIKKR 86
           K+++  G AS+LA+GTANPPNV  Q  +PD+YFR TNNE   +LK+KFKRICE S IKKR
Sbjct: 14  KSQRADGFASILAIGTANPPNVVDQSTYPDYYFRNTNNEDNTDLKDKFKRICERSAIKKR 73

Query: 85  HMFWTEEMLKQKPNVCAFMEENSLDTR 5
           HM+ TEE+LK+ P +CAF+E  SLDTR
Sbjct: 74  HMYLTEEILKKNPELCAFLEVPSLDTR 100


>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
           Sylvestris gi|99031630|pdb|1XES|B Chain B, Crystal
           Structure Of Stilbene Synthase From Pinus Sylvestris
           gi|99031631|pdb|1XES|C Chain C, Crystal Structure Of
           Stilbene Synthase From Pinus Sylvestris
           gi|99031632|pdb|1XES|D Chain D, Crystal Structure Of
           Stilbene Synthase From Pinus Sylvestris
           gi|99031633|pdb|1XET|A Chain A, Crystal Structure Of
           Stilbene Synthase From Pinus Sylvestris, Complexed With
           Methylmalonyl Coa gi|99031634|pdb|1XET|B Chain B,
           Crystal Structure Of Stilbene Synthase From Pinus
           Sylvestris, Complexed With Methylmalonyl Coa
           gi|99031635|pdb|1XET|C Chain C, Crystal Structure Of
           Stilbene Synthase From Pinus Sylvestris, Complexed With
           Methylmalonyl Coa gi|99031636|pdb|1XET|D Chain D,
           Crystal Structure Of Stilbene Synthase From Pinus
           Sylvestris, Complexed With Methylmalonyl Coa
          Length = 413

 Score =  120 bits (300), Expect = 1e-25
 Identities = 61/104 (58%), Positives = 76/104 (73%), Gaps = 5/104 (4%)
 Frame = -1

Query: 301 MVNNGSN--GVDDH---KAKKGGGLASVLALGTANPPNVFYQDAFPDFYFRITNNEHKVE 137
           +V  GS+  GVD     K ++  G AS+LA+GTANPPN   Q  +PDFYFRIT NEH  E
Sbjct: 14  LVPRGSHMGGVDFEGFRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTE 73

Query: 136 LKNKFKRICEGSMIKKRHMFWTEEMLKQKPNVCAFMEENSLDTR 5
           LK+KFKRICE S IK+R+M+ TEE+LK+ P+VCAF+E  SLD R
Sbjct: 74  LKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDAR 117


>gb|AAB24341.2| pinosylvin-forming stilbene synthase [Pinus sylvestris]
          Length = 392

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/87 (63%), Positives = 68/87 (78%)
 Frame = -1

Query: 265 KAKKGGGLASVLALGTANPPNVFYQDAFPDFYFRITNNEHKVELKNKFKRICEGSMIKKR 86
           K ++  G AS+LA+GTANPPN   Q  +PDFYFRIT NEH  ELK+KFKRICE S IK+R
Sbjct: 11  KLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQR 70

Query: 85  HMFWTEEMLKQKPNVCAFMEENSLDTR 5
           +M+ TEE+LK+ P+VCAF+E  SLD R
Sbjct: 71  YMYLTEEILKKNPDVCAFVEVPSLDAR 97


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