BLASTX nr result

ID: Dioscorea21_contig00026109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026109
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK20967.1| unknown [Picea sitchensis] gi|116790854|gb|ABK257...   106   2e-21
ref|XP_002272843.1| PREDICTED: probable histone H2A.3 [Vitis vin...   105   5e-21
ref|XP_002275483.1| PREDICTED: probable histone H2A.3 [Vitis vin...   105   5e-21
ref|XP_004151965.1| PREDICTED: probable histone H2A.1-like [Cucu...   104   9e-21
ref|NP_200275.1| histone H2A [Arabidopsis thaliana] gi|75311051|...   104   9e-21

>gb|ABK20967.1| unknown [Picea sitchensis] gi|116790854|gb|ABK25764.1| unknown
           [Picea sitchensis]
          Length = 140

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/74 (77%), Positives = 57/74 (77%)
 Frame = -3

Query: 224 KYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLL 45
           KYAERVGAGAP                 AGNAARDNKKTRIVPRHIQLAVRNDEELSKLL
Sbjct: 42  KYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLL 101

Query: 44  GTVTIANGGVMPNI 3
           GTVTIANGGVMPNI
Sbjct: 102 GTVTIANGGVMPNI 115


>ref|XP_002272843.1| PREDICTED: probable histone H2A.3 [Vitis vinifera]
           gi|296086995|emb|CBI33257.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score =  105 bits (261), Expect = 5e-21
 Identities = 56/74 (75%), Positives = 57/74 (77%)
 Frame = -3

Query: 224 KYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLL 45
           KYAERVGAGAP                 AGNAARDNKKTRIVPRHIQLAVRNDEELSKLL
Sbjct: 40  KYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLL 99

Query: 44  GTVTIANGGVMPNI 3
           G+VTIANGGVMPNI
Sbjct: 100 GSVTIANGGVMPNI 113


>ref|XP_002275483.1| PREDICTED: probable histone H2A.3 [Vitis vinifera]
           gi|297744943|emb|CBI38491.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  105 bits (261), Expect = 5e-21
 Identities = 56/74 (75%), Positives = 57/74 (77%)
 Frame = -3

Query: 224 KYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLL 45
           KYAERVGAGAP                 AGNAARDNKKTRIVPRHIQLAVRNDEELSKLL
Sbjct: 40  KYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLL 99

Query: 44  GTVTIANGGVMPNI 3
           G+VTIANGGVMPNI
Sbjct: 100 GSVTIANGGVMPNI 113


>ref|XP_004151965.1| PREDICTED: probable histone H2A.1-like [Cucumis sativus]
           gi|449522341|ref|XP_004168185.1| PREDICTED: probable
           histone H2A.1-like [Cucumis sativus]
          Length = 135

 Score =  104 bits (259), Expect = 9e-21
 Identities = 56/74 (75%), Positives = 56/74 (75%)
 Frame = -3

Query: 224 KYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLL 45
           KYAERVGAGAP                 AGNAARDNKKTRIVPRHIQLAVRNDEELSKLL
Sbjct: 40  KYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLL 99

Query: 44  GTVTIANGGVMPNI 3
           G VTIANGGVMPNI
Sbjct: 100 GDVTIANGGVMPNI 113


>ref|NP_200275.1| histone H2A [Arabidopsis thaliana]
           gi|75311051|sp|Q9LD28.1|H2A6_ARATH RecName: Full=Histone
           H2A.6; AltName: Full=HTA1; AltName: Full=Protein
           RESISTANT TO AGROBACTERIUM TRANSFORMATION 5
           gi|7595337|gb|AAF64418.1|AF204967_1 histone H2A
           [Arabidopsis thaliana]
           gi|7595339|gb|AAF64419.1|AF204968_1 histone H2A
           [Arabidopsis thaliana] gi|9758956|dbj|BAB09343.1|
           histone H2A [Arabidopsis thaliana]
           gi|21593834|gb|AAM65801.1| histone H2A [Arabidopsis
           thaliana] gi|28393261|gb|AAO42059.1| putative histone
           H2A protein [Arabidopsis thaliana]
           gi|28827756|gb|AAO50722.1| putative histone H2A protein
           [Arabidopsis thaliana] gi|332009138|gb|AED96521.1|
           histone H2A [Arabidopsis thaliana]
          Length = 130

 Score =  104 bits (259), Expect = 9e-21
 Identities = 56/74 (75%), Positives = 56/74 (75%)
 Frame = -3

Query: 224 KYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKTRIVPRHIQLAVRNDEELSKLL 45
           KYAERVGAGAP                 AGNAARDNKKTRIVPRHIQLAVRNDEELSKLL
Sbjct: 40  KYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLL 99

Query: 44  GTVTIANGGVMPNI 3
           G VTIANGGVMPNI
Sbjct: 100 GDVTIANGGVMPNI 113


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