BLASTX nr result

ID: Dioscorea21_contig00026056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026056
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ11351.1| hypothetical protein OsJ_01218 [Oryza sativa Japo...    74   2e-11
ref|NP_001042675.1| Os01g0266100 [Oryza sativa Japonica Group] g...    74   2e-11
ref|XP_003565628.1| PREDICTED: uncharacterized protein LOC100823...    71   8e-11
ref|XP_003559771.1| PREDICTED: putative RING-H2 finger protein A...    71   8e-11
gb|AFK45483.1| unknown [Medicago truncatula]                           70   2e-10

>gb|EAZ11351.1| hypothetical protein OsJ_01218 [Oryza sativa Japonica Group]
          Length = 274

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/85 (45%), Positives = 48/85 (56%)
 Frame = +2

Query: 221 CDLKLSVVKYEGGHDDQVDKEEQVVCVFCLCEVNEGDEIREIKCHHVFHLACLDKWLDLW 400
           CD +L+V  Y  G D        V CVFCL  V++G+E+RE++C HVFH ACLD WL L 
Sbjct: 154 CD-RLAVAMYRRGRD-----AAPVDCVFCLSRVDDGEEVRELRCRHVFHRACLDAWLVLP 207

Query: 401 GDTCPWCRVSLSTTMMEKKKSEDYD 475
             TCP CR  L     E  +S   D
Sbjct: 208 RATCPLCRDCLLPPPCEPPRSFPLD 232


>ref|NP_001042675.1| Os01g0266100 [Oryza sativa Japonica Group]
           gi|6815070|dbj|BAA90357.1| unknown protein [Oryza sativa
           Japonica Group] gi|113532206|dbj|BAF04589.1|
           Os01g0266100 [Oryza sativa Japonica Group]
           gi|125525306|gb|EAY73420.1| hypothetical protein
           OsI_01302 [Oryza sativa Indica Group]
           gi|215693226|dbj|BAG88608.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 204

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/85 (45%), Positives = 48/85 (56%)
 Frame = +2

Query: 221 CDLKLSVVKYEGGHDDQVDKEEQVVCVFCLCEVNEGDEIREIKCHHVFHLACLDKWLDLW 400
           CD +L+V  Y  G D        V CVFCL  V++G+E+RE++C HVFH ACLD WL L 
Sbjct: 84  CD-RLAVAMYRRGRD-----AAPVDCVFCLSRVDDGEEVRELRCRHVFHRACLDAWLVLP 137

Query: 401 GDTCPWCRVSLSTTMMEKKKSEDYD 475
             TCP CR  L     E  +S   D
Sbjct: 138 RATCPLCRDCLLPPPCEPPRSFPLD 162


>ref|XP_003565628.1| PREDICTED: uncharacterized protein LOC100823364 [Brachypodium
           distachyon]
          Length = 217

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/65 (53%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +2

Query: 233 LSVVKYEGGHDDQVDKEEQVVCVFCLCEVNEGDEIREIKCHHVFHLACLDKWLDLW-GDT 409
           L+V  Y GG  D     E V CVFCL  + EGDE+RE++C HVFH ACLD WL +    T
Sbjct: 93  LAVAAYRGGGGDNGGAAE-VDCVFCLSRIEEGDEVRELRCRHVFHRACLDAWLLIRPRAT 151

Query: 410 CPWCR 424
           CP CR
Sbjct: 152 CPLCR 156


>ref|XP_003559771.1| PREDICTED: putative RING-H2 finger protein ATL50-like [Brachypodium
           distachyon]
          Length = 188

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/62 (53%), Positives = 38/62 (61%)
 Frame = +2

Query: 281 EEQVVCVFCLCEVNEGDEIREIKCHHVFHLACLDKWLDLWGDTCPWCRVSLSTTMMEKKK 460
           EE+V CV CL  V EGDE RE+ C HVFH ACLD WL     TCP CR  LS+    +  
Sbjct: 97  EEKVECVVCLSGVEEGDETRELACRHVFHRACLDAWLARPPATCPLCRARLSSAATPESD 156

Query: 461 SE 466
           S+
Sbjct: 157 SD 158


>gb|AFK45483.1| unknown [Medicago truncatula]
          Length = 136

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 28/50 (56%), Positives = 34/50 (68%)
 Frame = +2

Query: 284 EQVVCVFCLCEVNEGDEIREIKCHHVFHLACLDKWLDLWGDTCPWCRVSL 433
           E V CV CLC++ EGDEI  ++C H++H  CLDKWL     TCP CR SL
Sbjct: 54  EDVECVVCLCKIEEGDEISVLRCDHMYHKHCLDKWLSFKNHTCPLCRESL 103


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