BLASTX nr result

ID: Dioscorea21_contig00026053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026053
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like ...    67   3e-20
ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent hel...    67   3e-20
ref|XP_002306584.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-20
ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent hel...    72   4e-20
ref|XP_003571669.1| PREDICTED: uncharacterized protein LOC100842...    66   5e-20

>ref|XP_003529830.1| PREDICTED: probable helicase senataxin-like [Glycine max]
          Length = 1388

 Score = 67.4 bits (163), Expect(2) = 3e-20
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = -1

Query: 306 ERRERGWFDVIILPVQECKWNFKEGDVAVLSSPRPGPGLD 187
           E RERGW+DV +LPV E KW+FKEGDVA+LSSPRPG   D
Sbjct: 507 ESRERGWYDVKVLPVHEFKWSFKEGDVAILSSPRPGSAQD 546



 Score = 55.8 bits (133), Expect(2) = 3e-20
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -3

Query: 100 GASEEDAEPEVTGRVAGTVRRHVPVDTRDPLGA 2
           G++++D E EVTGRV GTVRRH+P+DTRDP GA
Sbjct: 542 GSAQDDGESEVTGRVVGTVRRHIPIDTRDPPGA 574


>ref|XP_003547681.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
           [Glycine max]
          Length = 1328

 Score = 67.4 bits (163), Expect(2) = 3e-20
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = -1

Query: 306 ERRERGWFDVIILPVQECKWNFKEGDVAVLSSPRPGPGLD 187
           E RERGW+DV +LPV E KW+FKEGDVA+LSSPRPG   D
Sbjct: 473 ESRERGWYDVKVLPVHEFKWSFKEGDVAILSSPRPGSAQD 512



 Score = 55.8 bits (133), Expect(2) = 3e-20
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -3

Query: 100 GASEEDAEPEVTGRVAGTVRRHVPVDTRDPLGA 2
           G++++D E EVTGRV GTVRRH+P+DTRDP GA
Sbjct: 508 GSAQDDGESEVTGRVVGTVRRHIPIDTRDPPGA 540


>ref|XP_002306584.1| predicted protein [Populus trichocarpa] gi|222856033|gb|EEE93580.1|
           predicted protein [Populus trichocarpa]
          Length = 1147

 Score = 72.8 bits (177), Expect(2) = 3e-20
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = -1

Query: 306 ERRERGWFDVIILPVQECKWNFKEGDVAVLSSPRPG 199
           ERRERGW+DVI+LP  ECKW FKEGDVAVLS+PRPG
Sbjct: 298 ERRERGWYDVIVLPANECKWTFKEGDVAVLSTPRPG 333



 Score = 50.4 bits (119), Expect(2) = 3e-20
 Identities = 20/29 (68%), Positives = 26/29 (89%)
 Frame = -3

Query: 88  EDAEPEVTGRVAGTVRRHVPVDTRDPLGA 2
           +D EP++ GRVAGTVRRH+P+D+RDP GA
Sbjct: 335 DDEEPDINGRVAGTVRRHIPLDSRDPPGA 363


>ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
           [Vitis vinifera]
          Length = 1375

 Score = 72.4 bits (176), Expect(2) = 4e-20
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = -1

Query: 306 ERRERGWFDVIILPVQECKWNFKEGDVAVLSSPRPG 199
           ERRERGW+DVI+LP  ECKW FKEGDVA+LS+PRPG
Sbjct: 522 ERRERGWYDVIVLPANECKWTFKEGDVAILSAPRPG 557



 Score = 50.4 bits (119), Expect(2) = 4e-20
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = -3

Query: 88  EDAEPEVTGRVAGTVRRHVPVDTRDPLGA 2
           +D E E++GRVAGTVRRH P+DTRDP+GA
Sbjct: 559 DDEEAEISGRVAGTVRRHNPIDTRDPVGA 587


>ref|XP_003571669.1| PREDICTED: uncharacterized protein LOC100842761 [Brachypodium
           distachyon]
          Length = 1452

 Score = 65.9 bits (159), Expect(2) = 5e-20
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -1

Query: 306 ERRERGWFDVIILPVQECKWNFKEGDVAVLSSPRPGP 196
           +RRERGW+DV++LP  E KW FKEG+VAVLS PRPGP
Sbjct: 501 DRRERGWYDVVVLPTHEYKWIFKEGEVAVLSFPRPGP 537



 Score = 56.6 bits (135), Expect(2) = 5e-20
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = -3

Query: 157 VKLPESTSATRSNKRNIHAGASEEDAEPEVTGRVAGTVRRHVPVDTRDPLGA 2
           +  P    A++S++ N  A AS EDAE E  GR+ GTVRRH+P+DTRDP+GA
Sbjct: 530 LSFPRPGPASQSSRSNRKAVASNEDAEAEC-GRLVGTVRRHMPIDTRDPIGA 580


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