BLASTX nr result

ID: Dioscorea21_contig00026050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00026050
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27934.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002279809.1| PREDICTED: uncharacterized protein LOC100264...   126   2e-27
ref|XP_004135702.1| PREDICTED: uncharacterized protein LOC101208...   124   1e-26
ref|XP_002309221.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
gb|ADX60169.1| HRT transcription factor [Zea mays]                    122   4e-26

>emb|CBI27934.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/103 (56%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
 Frame = +3

Query: 69  SRSKREECKSTEHDSDFSKWQVLIGPKDWEDYALGKDGVGRYRIHNLPQCFSCSGLYELA 248
           SR KRE+CK T+HDS+F+KW++L+GP DWED++  K+G  RYR+HNLP C  C G+YEL 
Sbjct: 10  SRLKREDCKRTKHDSEFTKWKILVGPSDWEDHSSRKEGAERYRVHNLPLCCHCPGVYELG 69

Query: 249 ISKIPT-KGRKSREPPLDAIVVVYLGHSDNVRARLQEYGRAGS 374
           IS  PT  GR+  +     IVVVYLG ++++RARLQ YGR+G+
Sbjct: 70  ISVSPTGLGREVGKLDPAHIVVVYLGQAEDIRARLQHYGRSGA 112


>ref|XP_002279809.1| PREDICTED: uncharacterized protein LOC100264589 [Vitis vinifera]
          Length = 491

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/103 (56%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
 Frame = +3

Query: 69  SRSKREECKSTEHDSDFSKWQVLIGPKDWEDYALGKDGVGRYRIHNLPQCFSCSGLYELA 248
           SR KRE+CK T+HDS+F+KW++L+GP DWED++  K+G  RYR+HNLP C  C G+YEL 
Sbjct: 10  SRLKREDCKRTKHDSEFTKWKILVGPSDWEDHSSRKEGAERYRVHNLPLCCHCPGVYELG 69

Query: 249 ISKIPT-KGRKSREPPLDAIVVVYLGHSDNVRARLQEYGRAGS 374
           IS  PT  GR+  +     IVVVYLG ++++RARLQ YGR+G+
Sbjct: 70  ISVSPTGLGREVGKLDPAHIVVVYLGQAEDIRARLQHYGRSGA 112


>ref|XP_004135702.1| PREDICTED: uncharacterized protein LOC101208130 [Cucumis sativus]
           gi|449522410|ref|XP_004168219.1| PREDICTED:
           uncharacterized protein LOC101231195 [Cucumis sativus]
          Length = 478

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
 Frame = +3

Query: 72  RSKREECKSTEHDSDFSKWQVLIGPKDWEDYALGKDGVGRYRIHNLPQCFSCSGLYELAI 251
           R KRE+CK T+HDSDFSKW++L+   DWEDY+LGK+G  RYRIHNLP+  S  GLYEL I
Sbjct: 9   RLKREDCKRTKHDSDFSKWEILVASSDWEDYSLGKEGAERYRIHNLPK-VSGPGLYELGI 67

Query: 252 SKIPT-KGRKSREPPLDAIVVVYLGHSDNVRARLQEYGRAGS 374
           +   +  GR+  +   D IVVVYLG +DNVR RLQ YGR+GS
Sbjct: 68  TVSSSGLGREIAKLDADWIVVVYLGEADNVRTRLQHYGRSGS 109


>ref|XP_002309221.1| predicted protein [Populus trichocarpa] gi|222855197|gb|EEE92744.1|
           predicted protein [Populus trichocarpa]
          Length = 689

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/108 (58%), Positives = 78/108 (72%), Gaps = 3/108 (2%)
 Frame = +3

Query: 60  EMSSRSKREECKSTEHDSDFSKWQVLIGPKDWEDYALGKDGVGRYRIHNLPQCFSCSGLY 239
           ++ +R KRE+ K T+HDS FSKWQ+LIGP DW+DY LGK+G  RYRIHNLP   S  GLY
Sbjct: 2   DVGARLKREDYKRTKHDSSFSKWQLLIGPSDWQDYFLGKEGASRYRIHNLPTT-SGPGLY 60

Query: 240 ELAISKIPTKGRKSREP---PLDAIVVVYLGHSDNVRARLQEYGRAGS 374
           EL I+ +P  G   R+      D IVVVYLG +DNVR RLQ+YGR+G+
Sbjct: 61  ELGIA-VPRSGLSRRDVGKLVRDDIVVVYLGQADNVRTRLQQYGRSGA 107


>gb|ADX60169.1| HRT transcription factor [Zea mays]
          Length = 538

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/104 (56%), Positives = 76/104 (73%)
 Frame = +3

Query: 63  MSSRSKREECKSTEHDSDFSKWQVLIGPKDWEDYALGKDGVGRYRIHNLPQCFSCSGLYE 242
           ++SR KRE+C  T+HDS FS W+VL+GP DW D+A GK+GV RYRI NLP  F   GLYE
Sbjct: 8   VTSRLKREDCPRTKHDSLFSPWKVLVGPSDWRDHAAGKEGVQRYRIRNLPDNF--PGLYE 65

Query: 243 LAISKIPTKGRKSREPPLDAIVVVYLGHSDNVRARLQEYGRAGS 374
           L ++    +G +SR      +VVVYLG +D+VRARLQ+YGR+GS
Sbjct: 66  LGVACAADEGVRSRRRDARGVVVVYLGQADSVRARLQQYGRSGS 109


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